Jeremy Schmutz

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Jane GrimwoodFaculty Investigator, HudsonAlpha Institute for BiotechnologyVerified email at hudsonalpha.com
Jerry JenkinsHudsonAlpha InstituteVerified email at hudsonalpha.org
Richard M. MyersHudsonAlpha Institute for BiotechnologyVerified email at hudsonalpha.com
Avinash SreedasyamComputational Biologist, HudsonAlpha Institute for BiotechnologyVerified email at hudsonalpha.org
Gerald TuskanORNLVerified email at ornl.gov
Igor GrigorievJoint Genome Institute, Lawrence Berkeley National Laboratory, University of California BerkeleyVerified email at lbl.gov
Asaf SalamovJoint Genome InstituteVerified email at lbl.gov
Sujan MamidiHudsonAlpha Institute for BiotechnologyVerified email at hudsonalpha.org
Scott JacksonLead Genetic Pipeline Design @ Bayer Crop ScienceVerified email at bayer.com
Pamela RonaldProfessor, Dept Plant Pathology and the Genome Center, UC DavisVerified email at ucdavis.edu
Felicity JonesUniversity of GroningenVerified email at rug.nl
Thomas E. JuengerUniversity of Texas at Austin, Department of Integrative BiologyVerified email at austin.utexas.edu
Frank ChanUniversity of GroningenVerified email at tue.mpg.de
Timothy TschaplinskiGroup Leader, Distinguished Research Staff, Oak Ridge National LaboratoryVerified email at ornl.gov
Catherine PeichelProfessor, Institute of Ecology and Evolution, University of BernVerified email at iee.unibe.ch
Stephen DiFazioProfessor of Biology, West Virginia UniversityVerified email at mail.wvu.edu
Phillip McCleanNorth Dakota State UniversityVerified email at ndsu.edu
Robert J SchmitzDept. of Genetics, University of GeorgiaVerified email at uga.edu
Miriam LandResearcher, Oak Ridge National LaboratoryVerified email at ornl.gov
Qijian SongUSDAVerified email at ars.usda.gov

Jeremy Schmutz

HudsonAlpha Institute for Biotechnology and Joint Genome Institute

Verified email at hudsonalpha.com - Homepage

Plant genomics Bioinformatics Genomics Genome biology


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Initial sequencing and analysis of the human genome ES Lander, LM Linton, B Birren, C Nusbaum, MC Zody, J Baldwin, ... Nature 409 (6822), 860-921, 2001	25027*	2001
Finishing the euchromatic sequence of the human genome FS Collins, ES Lander, J Rogers, RH Waterston, I Conso Nature 431 (7011), 931-945, 2004	5305*	2004
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray) GA Tuskan, S Difazio, S Jansson, J Bohlmann, I Grigoriev, U Hellsten, ... Science 313 (5793), 1596, 2006	5020	2006
Genome sequence of the palaeopolyploid soybean J Schmutz, SB Cannon, J Schlueter, J Ma, T Mitros, W Nelson, DL Hyten, ... Nature 463 (7278), 178-183, 2010	4737	2010
The Sorghum bicolor genome and the diversification of grasses AH Paterson, JE Bowers, R Bruggmann, I Dubchak, J Grimwood, ... Nature 457 (7229), 551-556, 2009	3378	2009
The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions SS Merchant, SE Prochnik, O Vallon, EH Harris, SJ Karpowicz, ... Science 318 (5848), 245-250, 2007	3055	2007
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences RL Strausberg, EA Feingold, LH Grouse, JG Derge, RD Klausner, ... Proceedings of the National Academy of Sciences of the United States of …, 2002	2551*	2002
The ENCODE (ENCyclopedia of DNA elements) project EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ... Science 306 (5696), 636-640, 2004	2425	2004
The Phaeodactylum genome reveals the evolutionary history of diatom genomes C Bowler, AE Allen, JH Badger, J Grimwood, K Jabbari, A Kuo, ... Nature 456 (7219), 239-244, 2008	1933	2008
The genomic basis of adaptive evolution in threespine sticklebacks FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ... Nature 484 (7392), 55, 2012	1864	2012
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ... Science 336 (6089), 1715-1719, 2012	1824	2012
The amphioxus genome and the evolution of the chordate karyotype NH Putnam, T Butts, DEK Ferrier, RF Furlong, U Hellsten, T Kawashima, ... Nature 453 (7198), 1064-1071, 2008	1715	2008
Widespread parallel evolution in sticklebacks by repeated fixation of ectodysplasin alleles PF Colosimo, KE Hosemann, S Balabhadra, G Villarreal, M Dickson, ... Science 307 (5717), 1928, 2005	1627	2005
A reference genome for common bean and genome-wide analysis of dual domestications J Schmutz, PE McClean, S Mamidi, GA Wu, SB Cannon, J Grimwood, ... Nature genetics 46 (7), 707-713, 2014	1394	2014
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres AH Paterson, JF Wendel, H Gundlach, H Guo, J Jenkins, D Jin, ... Nature 492 (7429), 423-427, 2012	1213	2012
The genome of Tetranychus urticae reveals herbivorous pest adaptations M Grbić, T Van Leeuwen, RM Clark, S Rombauts, P Rouzé, V Grbić, ... Nature 479 (7374), 487-492, 2011	1202	2011
The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution International Peach Genome Initiative, I Verde, AG Abbott, S Scalabrin, ... Nature genetics 45 (5), 487-494, 2013	1185	2013
The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis F Martin, A Aerts, D Ahren, A Brun, EGJ Danchin, F Duchaussoy, J Gibon, ... Nature 452 (7183), 88-92, 2008	1150	2008
Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer YF Chan, ME Marks, FC Jones, G Villarreal, MD Shapiro, SD Brady, ... Science 327 (5963), 302, 2010	1142	2010
Insights into land plant evolution garnered from the Marchantia polymorpha genome JL Bowman, T Kohchi, KT Yamato, J Jenkins, S Shu, K Ishizaki, ... Cell 171 (2), 287-304. e15, 2017	1083	2017

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