Paul Daly
Paul Daly
Assistant Professor, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Verified email at - Homepage
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Isolation of lactobacilli with probiotic properties from the human stomach
KA Ryan, T Jayaraman, P Daly, C Canchaya, S Curran, F Fang, ...
Letters in applied microbiology 47 (4), 269-274, 2008
Strain-specific inhibition of Helicobacter pylori by Lactobacillus salivarius and other lactobacilli
KA Ryan, P Daly, Y Li, C Hooton, PW O'Toole
Journal of Antimicrobial Chemotherapy 61 (4), 831-834, 2008
The role of carbon starvation in the induction of enzymes that degrade plant-derived carbohydrates in Aspergillus niger
JM van Munster, P Daly, S Delmas, ST Pullan, MJ Blythe, S Malla, ...
Fungal genetics and biology 72, 34-47, 2014
Seed priming and foliar application with jasmonic acid enhance salinity stress tolerance of soybean (Glycine max L.) seedlings
MS Sheteiwy, H Shao, W Qi, P Daly, A Sharma, H Shaghaleh, ...
Journal of the Science of Food and Agriculture, 2020
Transcriptomic responses of mixed cultures of ascomycete fungi to lignocellulose using dual RNA-seq reveal inter-species antagonism and limited beneficial effects on CAZyme …
P Daly, JM van Munster, M Kokolski, F Sang, MJ Blythe, S Malla, ...
Fungal Genetics and Biology 102, 4-21, 2017
RNA-sequencing reveals the complexities of the transcriptional response to lignocellulosic biofuel substrates in Aspergillus niger
ST Pullan, P Daly, S Delmas, R Ibbett, M Kokolski, A Neiteler, ...
Fungal biology and biotechnology 1, 1-14, 2014
Induction of plant cell wall degrading CAZyme encoding genes by lignocellulose-derived monosaccharides and cellobiose in the white-rot fungus Dichomitus squalens
SC López, M Peng, TY Issak, P Daly, RP de Vries, MR Mäkelä
Applied and Environmental Microbiology, AEM. 00403-18, 2018
RNA i‐suppression of barley caffeic acid O‐methyltransferase modifies lignin despite redundancy in the gene family
P Daly, C McClellan, M Maluk, H Oakey, C Lapierre, R Waugh, ...
Plant Biotechnology Journal, 2018
Dichomitus squalens partially tailors its molecular responses to the composition of solid wood
P Daly, S Casado López, M Peng, CS Lancefield, SO Purvine, YM Kim, ...
Environmental Microbiology, 2018
ARA1 regulates not only L-arabinose but also D-galactose catabolism in Trichoderma reesei
T Benocci, MV Aguilar-Pontes, RS Kun, B Seiboth, RP de Vries, P Daly
FEBS Letters, 2017
From lignocellulose to plastics: Knowledge transfer on the degradation approaches by fungi
P Daly, F Cai, CP Kubicek, S Jiang, M Grujic, MJ Rahimi, MS Sheteiwy, ...
Biotechnology advances 50, 107770, 2021
Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
P Daly, JM Van Munster, MJ Blythe, R Ibbett, M Kokolski, S Gaddipati, ...
biotechnology for biofuels 10 (1), 1-19, 2017
Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation
P Daly, M Peng, HD Mitchell, YM Kim, C Ansong, H Brewer, P De Gijsel, ...
Environmental Microbiology 22 (3), 1154-1166, 2020
Glucose-mediated repression of plant biomass utilization in the white-rot fungus Dichomitus squalens
P Daly, M Peng, MD Falco, A Lipzen, M Wang, V Ng, IV Grigoriev, ...
Applied and Environmental Microbiology, 2019
Draft genome sequences of three monokaryotic isolates of the white-rot basidiomycete fungus Dichomitus squalens
S Casado López, M Peng, P Daly, B Andreopoulos, J Pangilinan, ...
Microbiology resource announcements 8 (18), e00264-19, 2019
Enzymatic adaptation of Podospora anserina to different plant biomass provides leads to optimized commercial enzyme cocktails
T Benocci, P Daly, MV Aguilar Pontes, K Lail, M Wang, A Lipzen, V Ng, ...
Biotechnology Journal, 1800185, 2018
Transcriptional regulation and responses in filamentous fungi exposed to lignocellulose
P Daly, JM van Munster, R Raulo, DB Archer
Silva R, editor. Fungal Biotechnology for Biofuels. Sharjah, UAE: Bentham …, 2016
CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
M Peng, C Khosravi, RJM Lubbers, RS Kun, MVA Pontes, E Battaglia, ...
The Cell Surface 7, 100050, 2021
Genetic transformation of the white-rot fungus Dichomitus squalens using a new commercial protoplasting cocktail
P Daly, GG Slaghek, SC López, A Wiebenga, KS Hilden, RP de Vries, ...
Journal of microbiological methods 143, 38-43, 2017
Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
T Benocci, MV Aguilar-Pontes, RS Kun, RJM Lubbers, K Lail, M Wang, ...
Biotechnology for biofuels 12 (1), 1-20, 2019
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