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Nicholas Roehner
Nicholas Roehner
Raytheon BBN Technologies
Verified email at raytheon.com - Homepage
Title
Cited by
Cited by
Year
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology
M Galdzicki, KP Clancy, E Oberortner, M Pocock, JY Quinn, CA Rodriguez, ...
Nature biotechnology 32 (6), 545-550, 2014
2842014
Sharing structure and function in biological design with SBOL 2.0
N Roehner, J Beal, K Clancy, B Bartley, G Misirli, R Grunberg, ...
ACS synthetic biology 5 (6), 498-506, 2016
832016
Synthetic biology open language (SBOL) version 2.0. 0
B Bartley, J Beal, K Clancy, G Misirli, N Roehner, E Oberortner, M Pocock, ...
Journal of integrative bioinformatics 12 (2), 902-991, 2015
672015
Design automation in synthetic biology
E Appleton, C Madsen, N Roehner, D Densmore
Cold Spring Harbor perspectives in biology 9 (4), a023978, 2017
652017
iBioSim 3: A Tool for Model-Based Genetic Circuit Design
L Watanabe, T Nguyen, M Zhang, Z Zundel, Z Zhang, C Madsen, ...
ACS synthetic biology 8 (7), 1560-1563, 2018
642018
Design and Test of Genetic Circuits UsingiBioSim
C Madsen, CJ Myers, T Patterson, N Roehner, JT Stevens, C Winstead
IEEE Design & Test of Computers 29 (3), 32-39, 2012
442012
Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration
LBA Woodruff, TE Gorochowski, N Roehner, TS Mikkelsen, D Densmore, ...
Nucleic acids research 45 (3), 1553-1565, 2017
422017
Synthetic biology open language (SBOL) version 1.1. 0
M Galdzicki, M Wilson, CA Rodriguez, MR Pocock, E Oberortner, L Adam, ...
362012
Synthetic biology open language (SBOL) version 2.2. 0
RS Cox, C Madsen, JA McLaughlin, T Nguyen, N Roehner, B Bartley, ...
Journal of integrative bioinformatics 15 (1), 2018
342018
libSBOLj 2.0: a java library to support SBOL 2.0
Z Zhang, T Nguyen, N Roehner, G Misirli, M Pocock, E Oberortner, ...
IEEE life sciences letters 1 (4), 34-37, 2015
332015
A methodology to annotate systems biology markup language models with the synthetic biology open language
N Roehner, CJ Myers
ACS synthetic biology 3 (2), 57-66, 2014
332014
Double dutch: a tool for designing combinatorial libraries of biological systems
N Roehner, EM Young, CA Voigt, DB Gordon, D Densmore
ACS Synthetic Biology 5 (6), 507-517, 2016
322016
Generating systems biology markup language models from the synthetic biology open language
N Roehner, Z Zhang, T Nguyen, CJ Myers
ACS synthetic biology 4 (8), 873-879, 2015
322015
Directed acyclic graph-based technology mapping of genetic circuit models
N Roehner, CJ Myers
ACS synthetic biology 3 (8), 543-555, 2014
282014
A framework for genetic logic synthesis
P Vaidyanathan, BS Der, S Bhatia, N Roehner, R Silva, CA Voigt, ...
Proceedings of the IEEE 103 (11), 2196-2207, 2015
262015
Utilizing stochastic model checking to analyze genetic circuits
C Madsen, CJ Myers, N Roehner, C Winstead, Z Zhang
2012 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2012
262012
Proposed data model for the next version of the Synthetic Biology Open Language
N Roehner, E Oberortner, M Pocock, J Beal, K Clancy, C Madsen, ...
ACS synthetic biology 4 (1), 57-71, 2015
252015
Synthetic biology open language (SBOL) version 2.3
C Madsen, AG Moreno, P Umesh, Z Palchick, N Roehner, C Atallah, ...
Journal of integrative bioinformatics 16 (2), 2019
242019
Needs and opportunities in bio-design automation: four areas for focus
E Appleton, D Densmore, C Madsen, N Roehner
Current Opinion in Chemical Biology 40, 111-118, 2017
242017
Synthetic biology open language (SBOL) version 2.1. 0
J Beal, RS Cox, R Grünberg, J McLaughlin, T Nguyen, B Bartley, M Bissell, ...
Journal of integrative bioinformatics 13 (3), 30-132, 2016
242016
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