| Fast, sensitive and accurate integration of single-cell data with Harmony I Korsunsky, N Millard, J Fan, K Slowikowski, F Zhang, K Wei, ... Nature methods 16 (12), 1289-1296, 2019 | 4751 | 2019 |
| Pathologically expanded peripheral T helper cell subset drives B cells in rheumatoid arthritis DA Rao, MF Gurish, JL Marshall, K Slowikowski, CY Fonseka, Y Liu, ... Nature 542 (7639), 110-114, 2017 | 976 | 2017 |
| Defining inflammatory cell states in rheumatoid arthritis joint synovial tissues by integrating single-cell transcriptomics and mass cytometry F Zhang, K Wei, K Slowikowski, CY Fonseka, DA Rao, S Kelly, ... Nature immunology 20 (7), 928-942, 2019 | 965 | 2019 |
| Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types HK Finucane, YA Reshef, V Anttila, K Slowikowski, A Gusev, A Byrnes, ... Nature genetics 50 (4), 621-629, 2018 | 936 | 2018 |
| The immune cell landscape in kidneys of patients with lupus nephritis A Arazi, DA Rao, CC Berthier, A Davidson, Y Liu, PJ Hoover, A Chicoine, ... Nature immunology 20 (7), 902-914, 2019 | 624 | 2019 |
| ggrepel: Automatically position non-overlapping text labels with ‘ggplot2’ K Slowikowski, A Schep, S Hughes R package version 0.9 1, 2021 | 523 | 2021 |
| Common genetic variants modulate pathogen-sensing responses in human dendritic cells MN Lee, C Ye, AC Villani, T Raj, W Li, TM Eisenhaure, SH Imboywa, ... Science 343 (6175), 1246980, 2014 | 491 | 2014 |
| Functionally distinct disease-associated fibroblast subsets in rheumatoid arthritis F Mizoguchi, K Slowikowski, K Wei, JL Marshall, DA Rao, SK Chang, ... Nature communications 9 (1), 789, 2018 | 478 | 2018 |
| Refining the role of de novo protein-truncating variants in neurodevelopmental disorders by using population reference samples JA Kosmicki, KE Samocha, DP Howrigan, SJ Sanders, K Slowikowski, ... Nature genetics 49 (4), 504-510, 2017 | 343 | 2017 |
| Tubular cell and keratinocyte single-cell transcriptomics applied to lupus nephritis reveal type I IFN and fibrosis relevant pathways E Der, H Suryawanshi, P Morozov, M Kustagi, B Goilav, S Ranabothu, ... Nature immunology 20 (7), 915-927, 2019 | 338 | 2019 |
| Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization DE Arking, SL Pulit, L Crotti, P Van Der Harst, PB Munroe, TT Koopmann, ... Nature genetics 46 (8), 826-836, 2014 | 336 | 2014 |
| Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ... Nature medicine 27 (3), 546-559, 2021 | 320 | 2021 |
| Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and … C Muus, MD Luecken, G Eraslan, A Waghray, G Heimberg, L Sikkema, ... BioRxiv, 2020.04. 19.049254, 2020 | 259 | 2020 |
| Ggrepel: automatically position non-overlapping text labels with ‘ggplot2’. R package version 0.9. 1 K Slowikowski https://CRAN. R-project. org/package= ggrepel, 2021 | 207 | 2021 |
| Single-cell transcriptomics in cancer: computational challenges and opportunities J Fan, K Slowikowski, F Zhang Experimental & Molecular Medicine 52 (9), 1452-1465, 2020 | 161 | 2020 |
| Mixed-effects association of single cells identifies an expanded effector CD4+ T cell subset in rheumatoid arthritis CY Fonseka, DA Rao, NC Teslovich, I Korsunsky, SK Hannes, ... Science translational medicine 10 (463), eaaq0305, 2018 | 160 | 2018 |
| Lymphocyte innateness defined by transcriptional states reflects a balance between proliferation and effector functions M Gutierrez-Arcelus, N Teslovich, AR Mola, RB Polidoro, A Nathan, H Kim, ... Nature communications 10 (1), 687, 2019 | 151 | 2019 |
| Disentangling the Effects of Colocalizing Genomic Annotations to Functionally Prioritize Non-coding Variants within Complex-Trait Loci G Trynka, HJ Westra, K Slowikowski, X Hu, H Xu, BE Stranger, RJ Klein, ... The American Journal of Human Genetics 152 (139), 97-139, 2015 | 148 | 2015 |
| 52 genetic loci influencing myocardial mass P Van der Harst, J van Setten, N Verweij, G Vogler, L Franke, ... Journal of the American College of Cardiology 68 (13), 1435-1448, 2016 | 129 | 2016 |
| Methods for high-dimensional analysis of cells dissociated from cryopreserved synovial tissue LT Donlin, DA Rao, K Wei, K Slowikowski, MJ McGeachy, JD Turner, ... Arthritis research & therapy 20, 1-15, 2018 | 113 | 2018 |
Soumya RaychaudhuriHarvard Medical School; Brigham and Women's Hospital, Broad InstituteVerified email at broadinstitute.org
