Reintroduction of the archaic variant of NOVA1 in cortical organoids alters neurodevelopment CA Trujillo, ES Rice, NK Schaefer, IA Chaim, EC Wheeler, AA Madrigal, ... Science 371 (6530), eaax2537, 2021 | 141 | 2021 |
Natural selection shaped the rise and fall of passenger pigeon genomic diversity GGR Murray, AER Soares, BJ Novak, NK Schaefer, JA Cahill, AJ Baker, ... Science 358 (6365), 951-954, 2017 | 140 | 2017 |
An ancestral recombination graph of human, Neanderthal, and Denisovan genomes NK Schaefer, B Shapiro, RE Green Science advances 7 (29), eabc0776, 2021 | 73 | 2021 |
Detecting hybridization using ancient DNA NK Schaefer, B Shapiro, RE Green Molecular ecology 25 (11), 2398-2412, 2016 | 34 | 2016 |
Comparative landscape of genetic dependencies in human and chimpanzee stem cells R She, T Fair, NK Schaefer, RA Saunders, BJ Pavlovic, JS Weissman, ... Cell 186 (14), 2977-2994. e23, 2023 | 16 | 2023 |
A novel NGS library preparation method to characterize native termini of fragmented DNA KM Harkins, NK Schaefer, CJ Troll, V Rao, J Kapp, C Naughton, ... Nucleic acids research 48 (8), e47-e47, 2020 | 14 | 2020 |
AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data NK Schaefer, B Shapiro, RE Green BMC Bioinformatics 18 (1), 203, 2017 | 10 | 2017 |
New middle chapter in the story of human evolution NK Schaefer, B Shapiro Science 365 (6457), 981-982, 2019 | 8 | 2019 |
Reintroduction of the archaic variant of NOVA1 in cortical organoids alters neurodevelopment. Science 371: eaax2537 CA Trujillo, ES Rice, NK Schaefer, IA Chaim, EC Wheeler, AA Madrigal, ... | 5 | 2021 |
Rethinking nomenclature for interspecies cell fusions BJ Pavlovic, D Fox, NK Schaefer, AA Pollen Nature Reviews Genetics 23 (5), 315-320, 2022 | 4 | 2022 |
Mapping cis-and trans-regulatory target genes of human-specific deletions T Fair, BJ Pavlovic, NK Schaefer, AA Pollen bioRxiv, 2023 | 3 | 2023 |
Interspecies Organoids Reveal Human-Specific Molecular Features of Dopaminergic Neuron Development and Vulnerability S Nolbrant, JL Wallace, J Ding, T Zhu, JL Sevetson, J Kajtez, IA Baldacci, ... bioRxiv, 2024.11. 14.623592, 2024 | | 2024 |
Insights into Human History from Fast, Heuristic Ancestral Recombination Graph Inference NK Schaefer, B Shapiro, RE Green Plant and Animal Genome XXVII Conference (January 12-16, 2019), 2019 | | 2019 |
New Tools for Localizing Ancestry Across Genomes of Hybrid Individuals Provide Insight into the Genetics of Speciation NK Schaefer UC Santa Cruz, 2019 | | 2019 |