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Alex H Wagner, PhD
Alex H Wagner, PhD
NHGRI Genomic Innovator, Asst. Prof. at Nationwide Children's Hospital and the Ohio State University
Verified email at nationwidechildrens.org - Homepage
Title
Cited by
Cited by
Year
DGIdb 3.0: a redesign and expansion of the drug–gene interaction database
KC Cotto, AH Wagner, YY Feng, S Kiwala, AC Coffman, G Spies, ...
Nucleic acids research 46 (D1), D1068-D1073, 2018
8402018
Integration of the Drug–Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts
SL Freshour, S Kiwala, KC Cotto, AC Coffman, JF McMichael, JJ Song, ...
Nucleic acids research 49 (D1), D1144-D1151, 2021
7582021
CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer
M Griffith, NC Spies, K Krysiak, JF McMichael, AC Coffman, AM Danos, ...
Nature genetics 49 (2), 170-174, 2017
5962017
DGIdb 2.0: mining clinically relevant drug–gene interactions
AH Wagner, AC Coffman, BJ Ainscough, NC Spies, ZL Skidmore, ...
Nucleic acids research 44 (D1), D1036-D1044, 2016
4032016
GenVisR: genomic visualizations in R
ZL Skidmore, AH Wagner, R Lesurf, KM Campbell, J Kunisaki, OL Griffith, ...
Bioinformatics 32 (19), 3012-3014, 2016
2992016
Non-exomic and synonymous variants in ABCA4 are an important cause of Stargardt disease
TA Braun, RF Mullins, AH Wagner, JL Andorf, RM Johnston, BB Bakall, ...
Human molecular genetics 22 (25), 5136-5145, 2013
2282013
GA4GH: International policies and standards for data sharing across genomic research and healthcare
HL Rehm, AJH Page, L Smith, JB Adams, G Alterovitz, LJ Babb, ...
Cell genomics 1 (2), 2021
1892021
Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics …
P Horak, M Griffith, AM Danos, BA Pitel, S Madhavan, X Liu, C Chow, ...
Genetics in Medicine 24 (5), 986-998, 2022
1612022
A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer
AH Wagner, B Walsh, G Mayfield, D Tamborero, D Sonkin, K Krysiak, ...
Nature genetics 52 (4), 448-457, 2020
155*2020
Recurrent WNT pathway alterations are frequent in relapsed small cell lung cancer
AH Wagner, S Devarakonda, ZL Skidmore, K Krysiak, A Ramu, L Trani, ...
Nature communications 9 (1), 3787, 2018
1422018
Exon-level expression profiling of ocular tissues
AH Wagner, VN Anand, WH Wang, JE Chatterton, D Sun, AR Shepard, ...
Experimental eye research 111, 105-111, 2013
1272013
DoCM: a database of curated mutations in cancer
BJ Ainscough, M Griffith, AC Coffman, AH Wagner, J Kunisaki, ...
Nature methods 13 (10), 806-807, 2016
1242016
Transcriptomic analysis across nasal, temporal, and macular regions of human neural retina and RPE/choroid by RNA-Seq
SS Whitmore, AH Wagner, AP DeLuca, AV Drack, EM Stone, BA Tucker, ...
Experimental eye research 129, 93-106, 2014
1212014
Standard operating procedure for somatic variant refinement of sequencing data with paired tumor and normal samples
EK Barnell, P Ronning, KM Campbell, K Krysiak, BJ Ainscough, LM Sheta, ...
Genetics in Medicine 21 (4), 972-981, 2019
922019
The GA4GH Phenopacket schema defines a computable representation of clinical data
JOB Jacobsen, M Baudis, GS Baynam, JS Beckmann, S Beltran, ...
Nature biotechnology 40 (6), 817-820, 2022
872022
DGIdb 5.0: rebuilding the drug–gene interaction database for precision medicine and drug discovery platforms
M Cannon, J Stevenson, K Stahl, R Basu, A Coffman, S Kiwala, ...
Nucleic acids research 52 (D1), D1227-D1235, 2024
862024
A deep learning approach to automate refinement of somatic variant calling from cancer sequencing data
BJ Ainscough, EK Barnell, P Ronning, KM Campbell, AH Wagner, ...
Nature genetics 50 (12), 1735-1743, 2018
852018
Mondo: Unifying diseases for the world, by the world
NA Vasilevsky, NA Matentzoglu, S Toro, JE Flack IV, H Hegde, DR Unni, ...
MedRxiv, 2022.04. 13.22273750, 2022
832022
Artificial intelligence and pathology: from principles to practice and future applications in histomorphology and molecular profiling
A Stenzinger, M Alber, M Allgäuer, P Jurmeister, M Bockmayr, J Budczies, ...
Seminars in cancer biology 84, 129-143, 2022
722022
A simple standard for sharing ontological mappings (SSSOM)
N Matentzoglu, JP Balhoff, SM Bello, C Bizon, M Brush, TJ Callahan, ...
Database 2022, baac035, 2022
712022
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