Alexander J. Probst

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Jillian BANFIELDUniversity of California BerkeleyVerified email at berkeley.edu
Brian C. ThomasCEO/Founder, Metagenomi.coVerified email at metagenomi.co
Karthik AnantharamanAssociate Professor, University of Wisconsin-MadisonVerified email at bact.wisc.edu
Gary AndersenLawrence Berkeley LaboratoryVerified email at lbl.gov
Cindy CastelleScientist, Metagenomi.coVerified email at metagenomi.co
Till L.V. BornemannPost-doctoral researcher at University Duisburg-Essen, GermanyVerified email at uni-due.de
Christine Moissl-EichingerMedical University GrazVerified email at medunigraz.at
Christopher T. BrownMetagenomi.coVerified email at metagenomi.co
Todd DeSantisCo-founder & Vice President, Informatics, Second Genome, Inc.Verified email at secondgenome.com
Laura HugAssociate Professor, University of Waterloo Department of BiologyVerified email at uwaterloo.ca
Kasthuri VenkateswaranNASA Jet Propulsion LaboratoryVerified email at jpl.nasa.gov
Parag VaishampayanSpace Biology Portfolio Scientist, NASA AmesVerified email at nasa.gov
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
Kari M FinstadLawrence Livermore National LaboratoryVerified email at llnl.gov
Brett J. BakerUniversity of Texas Austin, Dept of Integrative Biology and Dept. of Marine ScienceVerified email at utexas.edu
Christian MK SieberRocheVerified email at roche.com
Sarah P. EsserPhD student, University of Duisburg-EssenVerified email at uni-due.de
Itai SharonP.I. at Migal, Senior Lecturer at Tel Hai CollegeVerified email at itaisharon.net
Susannah TringeEnvironmental Genomics and Systems Biology, Lawrence Berkeley National LaboratoryVerified email at lbl.gov
David (Dudu) BursteinTel Aviv UniversityVerified email at tau.ac.il

Alexander J. Probst

Full Professor (W3), Research Alliance Ruhr, Faculty of Chemistry, University of Duisburg-Essen

Verified email at uni-due.de - Homepage

Microbial ecology Aquatic Microbiology Deep biosphere Archaea Environmental Health


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An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea D McDonald, MN Price, J Goodrich, EP Nawrocki, TZ DeSantis, A Probst, ... The ISME journal 6 (3), 610-618, 2011	5354	2011
A new view of the tree of life LA Hug, BJ Baker, K Anantharaman, CT Brown, AJ Probst, CJ Castelle, ... Nature microbiology 1 (5), 1-6, 2016	2223	2016
Deep-sea oil plume enriches indigenous oil-degrading bacteria TC Hazen, EA Dubinsky, TZ DeSantis, GL Andersen, YM Piceno, N Singh, ... Science 330 (6001), 204-208, 2010	1410	2010
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy CMK Sieber, AJ Probst, A Sharrar, BC Thomas, M Hess, SG Tringe, ... Nature microbiology 3 (7), 836-843, 2018	1098	2018
Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system K Anantharaman, CT Brown, LA Hug, I Sharon, CJ Castelle, AJ Probst, ... Nature communications 7 (1), 13219, 2016	1033	2016
New CRISPR–Cas systems from uncultivated microbes D Burstein, LB Harrington, SC Strutt, AJ Probst, K Anantharaman, ... Nature 542 (7640), 237-241, 2017	645	2017
Clades of huge phages from across Earth’s ecosystems B Al-Shayeb, R Sachdeva, LX Chen, F Ward, P Munk, A Devoto, ... Nature 578 (7795), 425-431, 2020	439	2020
Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations CJ Castelle, CT Brown, K Anantharaman, AJ Probst, RH Huang, ... Nature Reviews Microbiology 16 (10), 629-645, 2018	351	2018
Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface AJ Probst, B Ladd, JK Jarett, DE Geller-McGrath, CMK Sieber, ... Nature microbiology 3 (3), 328-336, 2018	257	2018
Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems D Burstein, CL Sun, CT Brown, I Sharon, K Anantharaman, AJ Probst, ... Nature communications 7 (1), 10613, 2016	241	2016
Transitory microbial habitat in the hyperarid Atacama Desert D Schulze-Makuch, D Wagner, SP Kounaves, K Mangelsdorf, KG Devine, ... Proceedings of the National Academy of Sciences 115 (11), 2670-2675, 2018	230	2018
Archaea on human skin AJ Probst, AK Auerbach, C Moissl-Eichinger PloS one 8 (6), e65388, 2013	224	2013
Insights into the ecology, evolution, and metabolism of the widespread Woesearchaeotal lineages X Liu, M Li, CJ Castelle, AJ Probst, Z Zhou, J Pan, Y Liu, JF Banfield, ... Microbiome 6, 1-16, 2018	223	2018
Microbiomes of the dust particles collected from the International Space Station and Spacecraft Assembly Facilities A Checinska, AJ Probst, P Vaishampayan, JR White, D Kumar, ... Microbiome 3, 1-18, 2015	221	2015
Genome-reconstruction for eukaryotes from complex natural microbial communities PT West, AJ Probst, IV Grigoriev, BC Thomas, JF Banfield Genome research 28 (4), 569-580, 2018	205	2018
Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO₂ concentrations AJ Probst, CJ Castelle, A Singh, CT Brown, K Anantharaman, I Sharon, ... Environmental microbiology 19 (2), 459-474, 2017	199	2017
Roadmap for naming uncultivated Archaea and Bacteria AE Murray, J Freudenstein, S Gribaldo, R Hatzenpichler, P Hugenholtz, ... Nature microbiology 5 (8), 987-994, 2020	164	2020
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy. Nat Microbiol 3: 836–843 CMK Sieber, AJ Probst, A Sharrar, BC Thomas, M Hess, SG Tringe, ...	158	2018
Expansion of the global RNA virome reveals diverse clades of bacteriophages RNA Virus Discovery Consortium Cell 185 (21), 4023-4037. e18, 2022	149	2022
Potential for microbial H₂ and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments AW Hernsdorf, Y Amano, K Miyakawa, K Ise, Y Suzuki, K Anantharaman, ... The ISME journal 11 (8), 1915-1929, 2017	144	2017

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