Kevin Coombes
Kevin Coombes
Professor of Bioinformatics and Computational Biology, UT M.D. Anderson Cancer Center
Verified email at osu.edu
Title
Cited by
Cited by
Year
Comprehensive molecular portraits of human breast tumours
D Koboldt, R Fulton, M McLellan, H Schmidt, J Kalicki-Veizer, ...
Nature 490 (7418), 61-70, 2012
78822012
Reproducibility of SELDI-TOF protein patterns in serum: comparing datasets from different experiments
KA Baggerly, JS Morris, KR Coombes
Bioinformatics 20 (5), 777-785, 2004
7662004
MicroRNA signatures associated with cytogenetics and prognosis in acute myeloid leukemia
R Garzon, S Volinia, CG Liu, C Fernandez-Cymering, T Palumbo, ...
Blood, The Journal of the American Society of Hematology 111 (6), 3183-3189, 2008
7562008
An epithelial–mesenchymal transition gene signature predicts resistance to EGFR and PI3K inhibitors and identifies Axl as a therapeutic target for overcoming EGFR inhibitor …
LA Byers, L Diao, J Wang, P Saintigny, L Girard, M Peyton, L Shen, Y Fan, ...
Clinical cancer research 19 (1), 279-290, 2013
7382013
A guide to MATLAB: for beginners and experienced users
BR Hunt, RL Lipsman, JM Rosenberg
Cambridge university press, 2014
4652014
Co-occurring genomic alterations define major subsets of KRAS-mutant lung adenocarcinoma with distinct biology, immune profiles, and therapeutic vulnerabilities
F Skoulidis, LA Byers, L Diao, VA Papadimitrakopoulou, P Tong, J Izzo, ...
Cancer discovery 5 (8), 860-877, 2015
4482015
Curcumin (diferuloylmethane) alters the expression profiles of microRNAs in human pancreatic cancer cells
M Sun, Z Estrov, Y Ji, KR Coombes, DH Harris, R Kurzrock
Molecular cancer therapeutics 7 (3), 464-473, 2008
4462008
Effect of KRAS Oncogene Substitutions on Protein Behavior: Implications for Signaling and Clinical Outcome
NT Ihle, LA Byers, ES Kim, P Saintigny, JJ Lee, GR Blumenschein, A Tsao, ...
Journal of the National Cancer Institute 104 (3), 228-239, 2012
4002012
Feature extraction and quantification for mass spectrometry in biomedical applications using the mean spectrum
JS Morris, KR Coombes, J Koomen, KA Baggerly, R Kobayashi
Bioinformatics 21 (9), 1764-1775, 2005
3872005
Improved peak detection and quantification of mass spectrometry data acquired from surface‐enhanced laser desorption and ionization by denoising spectra with the undecimated …
KR Coombes, S Tsavachidis, JS Morris, KA Baggerly, MC Hung, ...
Proteomics 5 (16), 4107-4117, 2005
3832005
Expression of autotaxin and lysophosphatidic acid receptors increases mammary tumorigenesis, invasion, and metastases
S Liu, M Umezu-Goto, M Murph, Y Lu, W Liu, F Zhang, S Yu, LC Stephens, ...
Cancer cell 15 (6), 539-550, 2009
3772009
Proteomic profiling identifies dysregulated pathways in small cell lung cancer and novel therapeutic targets including PARP1
LA Byers, J Wang, MB Nilsson, J Fujimoto, P Saintigny, J Yordy, U Giri, ...
Cancer discovery 2 (9), 798-811, 2012
3672012
Signal in noise: evaluating reported reproducibility of serum proteomic tests for ovarian cancer
KA Baggerly, JS Morris, SR Edmonson, KR Coombes
Journal of the National Cancer Institute 97 (4), 307-309, 2005
3632005
Deriving chemosensitivity from cell lines: Forensic bioinformatics and reproducible research in high-throughput biology
KA Baggerly, KR Coombes
The Annals of Applied Statistics, 1309-1334, 2009
2942009
microRNA fingerprinting of CLL patients with chromosome 17p deletion identify a miR-21 score that stratifies early survival
S Rossi, M Shimizu, E Barbarotto, MS Nicoloso, F Dimitri, D Sampath, ...
Blood, The Journal of the American Society of Hematology 116 (6), 945-952, 2010
2742010
Quality control and peak finding for proteomics data collected from nipple aspirate fluid by surface-enhanced laser desorption and ionization
KR Coombes, HA Fritsche Jr, C Clarke, JN Chen, KA Baggerly, JS Morris, ...
Clinical chemistry 49 (10), 1615-1623, 2003
2722003
Direct tandem mass spectrometry reveals limitations in protein profiling experiments for plasma biomarker discovery
JM Koomen, D Li, L Xiao, TC Liu, KR Coombes, J Abbruzzese, ...
Journal of proteome research 4 (3), 972-981, 2005
2432005
A patient-derived, pan-cancer EMT signature identifies global molecular alterations and immune target enrichment following epithelial-to-mesenchymal transition
MP Mak, P Tong, L Diao, RJ Cardnell, DL Gibbons, WN William, ...
Clinical Cancer Research 22 (3), 609-620, 2016
2392016
Functional proteomic profiling of AML predicts response and survival
SM Kornblau, R Tibes, YH Qiu, W Chen, HM Kantarjian, M Andreeff, ...
Blood, The Journal of the American Society of Hematology 113 (1), 154-164, 2009
2282009
A comprehensive approach to the analysis of matrix‐assisted laser desorption/ionization‐time of flight proteomics spectra from serum samples
KA Baggerly, JS Morris, J Wang, D Gold, LC Xiao, KR Coombes
Proteomics 3 (9), 1667-1672, 2003
2212003
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