Mahmut Uludag

Cited by

	All	Since 2020
Citations	4492	1709
h-index	15	12
i10-index	19	15

580

290

145

435

201020112012201320142015201620172018201920202021202220232024202520 14 30 23 124 306 469 574 579 554 362 359 351 317 259 60

Public access

View all

8 articles

0 articles

available

not available

Based on funding mandates

Co-authors

Rodrigo LopezHead of Web Production. EMBL-EBI (Retired August 2022)Verified email at ebi.ac.uk
Hamish McWilliamRobert Gordon UniversityVerified email at bioinfo-user.org.uk
Silvano SquizzatoEuropean Bioinformatics Institute (EMBL-EBI)Verified email at ebi.ac.uk
Weizhong LiZhongshan School of Medicine, Sun Yat-sen UniversityVerified email at mail.sysu.edu.cn
Christophe Van NesteBiodiversity Informatician, Meise Botanical GardenVerified email at plantentuinmeise.be
Arturo Magana-MoraLead Data Scientist, Saudi AramcoVerified email at kaust.edu.sa
Mehmet Resit TolunProfessor @ Cankaya UniversityVerified email at cankaya.edu.tr
Dr. Arwa RaiesSenior Data Scientist at Center for Genomics Research (CGR) at AstraZenecaVerified email at astrazeneca.com
Matúš KalašSenior Engineer / Infrastructure Scientist, Department of Informatics, University of BergenVerified email at uib.no
Stephen PettiferReader, School of Computer Science, The University of ManchesterVerified email at manchester.ac.uk
Inge JonassenProfessor, Head of Department of Informatics, University of BergenVerified email at uib.no
James MaloneCTO, BenevolentAIVerified email at benevolent.ai
Dan BolserFree ManVerified email at ebi.ac.uk
Hayri Sever, Ph.D.Professor of Computer Engineering, Cankaya UniversityVerified email at cankaya.edu.tr
Saleh Abu-SoudPrincess Sumaya University for TechnologyVerified email at psut.edu.jo
Haitham AshoorPrincipal Scientist at TakedaVerified email at kaust.edu.sa
Tanvir Alam, PhDHamad bin Khalifa University, Doha, QatarVerified email at hbku.edu.qa
Aleksandar RadovanovicQuantum Computing Institute, Cape Town, South AfricaVerified email at radovanovic.com
Rozaimi Razali, PhDQatar UniversityVerified email at qu.edu.qa
Ameerah BokhariPh.D. in BioscienceVerified email at kaust.edu.sa

Mahmut Uludag

Software Developer, King Abdullah University of Science and Technology

Verified email at kaust.edu.sa - Homepage

bioinformatics data integration


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Analysis tool web services from the EMBL-EBI H McWilliam, W Li, M Uludag, S Squizzato, YM Park, N Buso, AP Cowley, ... Nucleic acids research 41 (W1), W597-W600, 2013	2129	2013
The EMBL-EBI bioinformatics web and programmatic tools framework W Li, A Cowley, M Uludag, T Gur, H McWilliam, S Squizzato, YM Park, ... Nucleic acids research 43 (W1), W580-W584, 2015	1223	2015
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats J Ison, M Kalaš, I Jonassen, D Bolser, M Uludag, H McWilliam, J Malone, ... Bioinformatics 29 (10), 1325-1332, 2013	314	2013
Sequenceserver: a modern graphical user interface for custom BLAST databases A Priyam, BJ Woodcroft, V Rai, I Moghul, A Munagala, F Ter, ... Molecular biology and evolution 36 (12), 2922-2924, 2019	291	2019
A simplified model for radiant heating and cooling panels IB Kilkis, SS Sager, M Uludag Simulation Practice and Theory 2 (2), 61-76, 1994	101	1994
Splice2Deep: An ensemble of deep convolutional neural networks for improved splice site prediction in genomic DNA S Albaradei, A Magana-Mora, M Thafar, M Uludag, VB Bajic, T Gojobori, ... Gene 763, 100035, 2020	55	2020
The EBI Search engine: providing search and retrieval functionality for biological data from EMBL-EBI S Squizzato, YM Park, N Buso, T Gur, A Cowley, W Li, M Uludag, S Pundir, ... Nucleic acids research 43 (W1), W585-W588, 2015	50	2015
The EMBRACE web service collection S Pettifer, J Ison, M Kalaš, D Thorne, P McDermott, I Jonassen, A Liaquat, ... Nucleic acids research 38 (suppl_2), W683-W688, 2010	44	2010
Ila-2: An inductive learning algorithm for knowledge discovery MR Tolun, H Sever, M Uludag, SM Abu-Soud Cybernetics & Systems 30 (7), 609-628, 1999	44	1999
FARNA: knowledgebase of inferred functions of non-coding RNA transcripts T Alam, M Uludag, M Essack, A Salhi, H Ashoor, JB Hanks, C Kapfer, ... Nucleic acids research 45 (5), 2838-2848, 2017	41	2017
Hybrid model for efficient prediction of poly (A) signals in human genomic DNA F Albalawi, A Chahid, X Guo, S Albaradei, A Magana-Mora, BR Jankovic, ... Methods 166, 31-39, 2019	24	2019
Soaplab2: more reliable Sesame door to bioinformatics programs M Senger, P Rice, A Bleasby, T Oinn, M Uludag Bioinformatics Open Source Conference, BOSC 8, 2008	18	2008
Metagenomic probing toward an atlas of the taxonomic and metabolic foundations of the global ocean genome E Laiolo, I Alam, M Uludag, T Jamil, S Agusti, T Gojobori, SG Acinas, ... Frontiers in Science 1, 1038696, 2024	17	2024
DES-mutation: system for exploring links of mutations and diseases V Kordopati, A Salhi, R Razali, A Radovanovic, F Tifratene, M Uludag, ... Scientific reports 8 (1), 13359, 2018	16	2018
Predicting bone metastasis using gene expression-based machine learning models S Albaradei, M Uludag, MA Thafar, T Gojobori, M Essack, X Gao Frontiers in Genetics 12, 771092, 2021	15	2021
Improved rule discovery performance on uncertainty M Tolun, H Sever, M Uludağ Research and Development in Knowledge Discovery and Data Mining, 310-321, 1998	15	1998
Automated counting of colony forming units using deep transfer learning from a model for congested scenes analysis SA Albaradei, F Napolitano, M Uludag, M Thafar, S Napolitano, M Essack, ... IEEE Access 8, 164340-164346, 2020	13	2020
Combining biomedical knowledge graphs and text to improve predictions for drug-target interactions and drug-indications M Alshahrani, A Almansour, A Alkhaldi, MA Thafar, M Uludag, M Essack, ... PeerJ 10, e13061, 2022	12	2022
PATH^cre8: A Tool That Facilitates the Searching for Heterologous Biosynthetic Routes O Motwalli, M Uludag, I Mijakovic, M Alazmi, VB Bajic, T Gojobori, X Gao, ... ACS synthetic biology 9 (12), 3217-3227, 2020	12	2020
MetastaSite: Predicting metastasis to different sites using deep learning with gene expression data S Albaradei, A Albaradei, A Alsaedi, M Uludag, MA Thafar, T Gojobori, ... Frontiers in Molecular Biosciences 9, 913602, 2022	9	2022

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors