| High contagiousness and rapid spread of severe acute respiratory syndrome coronavirus 2 S Sanche, YT Lin, C Xu, E Romero-Severson, N Hengartner, R Ke Emerging infectious diseases 26 (7), 1470, 2020 | 1932 | 2020 |
| The novel coronavirus, 2019-nCoV, is highly contagious and more infectious than initially estimated S Sanche, YT Lin, C Xu, E Romero-Severson, NW Hengartner, R Ke arXiv preprint arXiv:2002.03268, 2020 | 218 | 2020 |
| Estimating the reproductive number R0 of SARS-CoV-2 in the United States and eight European countries and implications for vaccination R Ke, E Romero-Severson, S Sanche, N Hengartner Journal of theoretical biology 517, 110621, 2021 | 145 | 2021 |
| HIV-1 transmission during early infection in men who have sex with men: a phylodynamic analysis EM Volz, E Ionides, EO Romero-Severson, MG Brandt, E Mokotoff, ... PLoS medicine 10 (12), e1001568, 2013 | 145 | 2013 |
| Phylogenetically resolving epidemiologic linkage EO Romero-Severson, I Bulla, T Leitner Proceedings of the National Academy of Sciences 113 (10), 2690-2695, 2016 | 123 | 2016 |
| Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection H Song, EE Giorgi, VV Ganusov, F Cai, G Athreya, H Yoon, O Carja, ... Nature communications 9 (1), 1928, 2018 | 117 | 2018 |
| Timing and order of transmission events is not directly reflected in a pathogen phylogeny E Romero-Severson, H Skar, I Bulla, J Albert, T Leitner Molecular biology and evolution 31 (9), 2472-2482, 2014 | 105 | 2014 |
| Investigating the concept and origin of viruses A Nasir, E Romero-Severson, JM Claverie Trends in microbiology 28 (12), 959-967, 2020 | 73 | 2020 |
| Fast spread of COVID-19 in Europe and the US suggests the necessity of early, strong and comprehensive interventions R Ke, S Sanche, E Romero-Severson, N Hengartner MedRxiv, 2020 | 60 | 2020 |
| Excess deaths reveal the true spatial, temporal and demographic impact of COVID-19 on mortality in Ecuador L Cuéllar, I Torres, E Romero-Severson, R Mahesh, N Ortega, ... International journal of epidemiology 51 (1), 54-62, 2022 | 57 | 2022 |
| Inference of transmission network structure from HIV phylogenetic trees F Giardina, EO Romero-Severson, J Albert, T Britton, T Leitner PLoS computational biology 13 (1), e1005316, 2017 | 52 | 2017 |
| Phylodynamic inference across epidemic scales EM Volz, E Romero-Severson, T Leitner Molecular Biology and Evolution 34 (5), 1276-1288, 2017 | 44 | 2017 |
| Phylogenetic patterns recover known HIV epidemiological relationships and reveal common transmission of multiple variants T Leitner, E Romero-Severson Nature microbiology 3 (9), 983-988, 2018 | 43 | 2018 |
| Semidominant Mutations in Reduced Epidermal Fluorescence 4 Reduce Phenylpropanoid Content in Arabidopsis J Stout, E Romero-Severson, MO Ruegger, C Chapple Genetics 178 (4), 2237-2251, 2008 | 43 | 2008 |
| Swift and extensive Omicron outbreak in China after sudden exit from ‘zero-COVID’policy EE Goldberg, Q Lin, EO Romero-Severson, R Ke Nature Communications 14 (1), 3888, 2023 | 40 | 2023 |
| Episodic HIV risk behavior can greatly amplify HIV prevalence and the fraction of transmissions from acute HIV infection X Zhang, L Zhong, E Romero-Severson, SJ Alam, CJ Henry, EM Volz, ... Statistical communications in infectious diseases 4 (1), 2012 | 37 | 2012 |
| Estimating the strength of selection for new SARS-CoV-2 variants CH Dorp, EE Goldberg, N Hengartner, R Ke, EO Romero-Severson Nature communications 12 (1), 7239, 2021 | 34 | 2021 |
| Excess deaths reveal unequal impact of COVID-19 in Ecuador L Cuéllar, I Torres, E Romero-Severson, R Mahesh, N Ortega, ... BMJ Global Health 6 (9), e006446, 2021 | 33 | 2021 |
| Assessing uncertainty in an anatomical site-specific gonorrhea transmission model of men who have sex with men IH Spicknall, KH Mayer, SO Aral, EO Romero-Severson Sexually transmitted diseases 46 (5), 321-328, 2019 | 31 | 2019 |
| Recombination enhances HIV-1 envelope diversity by facilitating the survival of latent genomic fragments in the plasma virus population TT Immonen, JM Conway, EO Romero-Severson, AS Perelson, T Leitner PLoS computational biology 11 (12), e1004625, 2015 | 28 | 2015 |
