Brandi Cantarel, PhD
Brandi Cantarel, PhD
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Structure, function and diversity of the healthy human microbiome
nature 486 (7402), 207-214, 2012
A core gut microbiome in obese and lean twins
PJ Turnbaugh, M Hamady, T Yatsunenko, BL Cantarel, A Duncan, RE Ley, ...
nature 457 (7228), 480-484, 2009
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics
BL Cantarel, PM Coutinho, C Rancurel, T Bernard, V Lombard, ...
Nucleic acids research 37 (suppl_1), D233-D238, 2009
A framework for human microbiome research
Nature 486 (7402), 215-221, 2012
MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes
BL Cantarel, I Korf, SMC Robb, G Parra, E Ross, B Moore, C Holt, ...
Genome research 18 (1), 188-196, 2008
Metabolic reconstruction for metagenomic data and its application to the human microbiome
S Abubucker, N Segata, J Goll, AM Schubert, J Izard, BL Cantarel, ...
PLoS computational biology 8 (6), e1002358, 2012
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla
MA Mahowald, FE Rey, H Seedorf, PJ Turnbaugh, RS Fulton, A Wollam, ...
Proceedings of the National Academy of Sciences 106 (14), 5859-5864, 2009
Obligate biotrophy features unraveled by the genomic analysis of rust fungi
S Duplessis, CA Cuomo, YC Lin, A Aerts, E Tisserant, C Veneault-Fourrey, ...
Proceedings of the National Academy of Sciences 108 (22), 9166-9171, 2011
Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis
F Martin, A Kohler, C Murat, R Balestrini, PM Coutinho, O Jaillon, ...
Nature 464 (7291), 1033-1038, 2010
Personalized immunomonitoring uncovers molecular networks that stratify lupus patients
R Banchereau, S Hong, B Cantarel, N Baldwin, J Baisch, M Edens, ...
Cell 165 (3), 551-565, 2016
Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease
AR Erickson, BL Cantarel, R Lamendella, Y Darzi, EF Mongodin, C Pan, ...
PloS one 7 (11), e49138, 2012
Complex carbohydrate utilization by the healthy human microbiome
BL Cantarel, V Lombard, B Henrissat
PloS one 7 (6), e28742, 2012
Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations
T Looft, HK Allen, BL Cantarel, UY Levine, DO Bayles, DP Alt, B Henrissat, ...
The ISME journal 8 (8), 1566-1576, 2014
Gut microbiota in multiple sclerosis: possible influence of immunomodulators
BL Cantarel, E Waubant, C Chehoud, J Kuczynski, TZ DeSantis, ...
Journal of Investigative Medicine 63 (5), 729-734, 2015
Bacteria from diverse habitats colonize and compete in the mouse gut
H Seedorf, NW Griffin, VK Ridaura, A Reyes, J Cheng, FE Rey, MI Smith, ...
Cell 159 (2), 253-266, 2014
IL-1 is a critical regulator of group 2 innate lymphoid cell function and plasticity
Y Ohne, JS Silver, LA Thompson-Snipes, MA Collet, JP Blanck, ...
Nature immunology 17 (6), 646-655, 2016
Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes
L Tasse, J Bercovici, S Pizzut-Serin, P Robe, J Tap, C Klopp, BL Cantarel, ...
Genome research 20 (11), 1605-1612, 2010
Analysis of the gut microbiota in the old order Amish and its relation to the metabolic syndrome
ML Zupancic, BL Cantarel, Z Liu, EF Drabek, KA Ryan, S Cirimotich, ...
Public Library of Science 7 (8), e43052, 2012
Dietary simple sugars alter microbial ecology in the gut and promote colitis in mice
S Khan, S Waliullah, V Godfrey, MAW Khan, RA Ramachandran, ...
Science translational medicine 12 (567), eaay6218, 2020
Frequent somatic mutations of the transcription factor ATBF1 in human prostate cancer
X Sun, HF Frierson, C Chen, C Li, Q Ran, KB Otto, BM Cantarel, ...
Nature genetics 37 (4), 407-412, 2005
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