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Manuel Garber
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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
M Guttman, I Amit, M Garber, C French, MF Lin, D Feldser, M Huarte, ...
Nature 458 (7235), 223-227, 2009
48812009
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
AM Khalil, M Guttman, M Huarte, M Garber, A Raj, D Rivea Morales, ...
Proceedings of the National Academy of Sciences 106 (28), 11667-11672, 2009
33692009
Genome sequence, comparative analysis and haplotype structure of the domestic dog
K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ...
Nature 438 (7069), 803-819, 2005
31882005
SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues
CGK Ziegler, SJ Allon, SK Nyquist, IM Mbano, VN Miao, CN Tzouanas, ...
Cell 181 (5), 1016-1035. e19, 2020
24592020
A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response
M Huarte, M Guttman, D Feldser, M Garber, MJ Koziol, ...
Cell 142 (3), 409-419, 2010
24492010
lincRNAs act in the circuitry controlling pluripotency and differentiation
M Guttman, J Donaghey, BW Carey, M Garber, JK Grenier, G Munson, ...
Nature 477 (7364), 295-300, 2011
22032011
Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
M Guttman, M Garber, JZ Levin, J Donaghey, J Robinson, X Adiconis, ...
Nature biotechnology 28 (5), 503-510, 2010
14882010
Computational methods for transcriptome annotation and quantification using RNA-seq
M Garber, MG Grabherr, M Guttman, C Trapnell
Nature methods 8 (6), 469-477, 2011
13322011
A high-resolution map of human evolutionary constraint using 29 mammals
K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ...
Nature 478 (7370), 476-482, 2011
12962011
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals
U Sharma, CC Conine, JM Shea, A Boskovic, AG Derr, XY Bing, ...
Science 351 (6271), 391-396, 2016
11842016
Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
S Loewer, MN Cabili, M Guttman, YH Loh, K Thomas, IH Park, M Garber, ...
Nature genetics 42 (12), 1113-1117, 2010
10952010
Genome sequence, comparative analysis, and population genetics of the domestic horse
CM Wade, E Giulotto, S Sigurdsson, M Zoli, S Gnerre, F Imsland, TL Lear, ...
Science 326 (5954), 865-867, 2009
9422009
Functional annotation of native enhancers with a Cas9–histone demethylase fusion
NA Kearns, H Pham, B Tabak, RM Genga, NJ Silverstein, M Garber, ...
Nature methods 12 (5), 401-403, 2015
8572015
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
A Pauli, E Valen, MF Lin, M Garber, NL Vastenhouw, JZ Levin, L Fan, ...
Genome research 22 (3), 577-591, 2012
8492012
Higher-order inter-chromosomal hubs shape 3D genome organization in the nucleus
SA Quinodoz, N Ollikainen, B Tabak, A Palla, JM Schmidt, E Detmar, ...
Cell 174 (3), 744-757. e24, 2018
8212018
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences
TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ...
Nature 447 (7141), 167-177, 2007
7872007
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells
M Rabani, JZ Levin, L Fan, X Adiconis, R Raychowdhury, M Garber, ...
Nature biotechnology 29 (5), 436-442, 2011
6612011
A composite of multiple signals distinguishes causal variants in regions of positive selection
SR Grossman, I Shylakhter, EK Karlsson, EH Byrne, S Morales, G Frieden, ...
Science 327 (5967), 883-886, 2010
5942010
Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses
I Amit, M Garber, N Chevrier, AP Leite, Y Donner, T Eisenhaure, ...
Science 326 (5950), 257-263, 2009
5742009
Identifying novel constrained elements by exploiting biased substitution patterns
M Garber, M Guttman, M Clamp, MC Zody, N Friedman, X Xie
Bioinformatics 25 (12), i54-i62, 2009
4302009
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