Zev N Kronenberg
Zev N Kronenberg
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Cited by
Cited by
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
Multi-platform discovery of haplotype-resolved structural variation in human genomes
MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ...
Nature communications 10 (1), 1784, 2019
Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs
A Kapusta, Z Kronenberg, VJ Lynch, X Zhuo, LA Ramsay, G Bourque, ...
PLoS genetics 9 (4), e1003470, 2013
Establishing cerebral organoids as models of human-specific brain evolution
AA Pollen, A Bhaduri, MG Andrews, TJ Nowakowski, OS Meyerson, ...
Cell 176 (4), 743-756. e17, 2019
Discovery and genotyping of structural variation from long-read haploid genome sequence data
J Huddleston, MJP Chaisson, KM Steinberg, W Warren, K Hoekzema, ...
Genome research 27 (5), 677-685, 2017
High-resolution comparative analysis of great ape genomes
ZN Kronenberg, IT Fiddes, D Gordon, S Murali, S Cantsilieris, ...
Science 360 (6393), eaar6343, 2018
De novo genic mutations among a Chinese autism spectrum disorder cohort
T Wang, H Guo, B Xiong, HAF Stessman, H Wu, BP Coe, TN Turner, Y Liu, ...
Nature communications 7 (1), 13316, 2016
Genomic patterns of de novo mutation in simplex autism
TN Turner, BP Coe, DE Dickel, K Hoekzema, BJ Nelson, MC Zody, ...
Cell 171 (3), 710-722. e12, 2017
Long-read sequence assembly of the gorilla genome
D Gordon, J Huddleston, MJP Chaisson, CM Hill, ZN Kronenberg, ...
Science 352 (6281), aae0344, 2016
Genomic diversity and evolution of the head crest in the rock pigeon
MD Shapiro, Z Kronenberg, C Li, ET Domyan, H Pan, M Campbell, H Tan, ...
Science 339 (6123), 1063-1067, 2013
Age-related mutations and chronic myelomonocytic leukemia
CC Mason, JS Khorashad, SK Tantravahi, TW Kelley, MS Zabriskie, ...
Leukemia 30 (4), 906-913, 2016
A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar
E Garrison, ZN Kronenberg, ET Dawson, BS Pedersen, P Prins
PLoS Computational Biology 18 (5), e1009123, 2022
Wham: identifying structural variants of biological consequence
ZN Kronenberg, EJ Osborne, KR Cone, BJ Kennedy, ET Domyan, ...
PLoS computational biology 11 (12), e1004572, 2015
Improved assembly and variant detection of a haploid human genome using single‐molecule, high‐fidelity long reads
MR Vollger, GA Logsdon, PA Audano, A Sulovari, D Porubsky, P Peluso, ...
Annals of human genetics 84 (2), 125-140, 2020
Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C
ZN Kronenberg, A Rhie, S Koren, GT Concepcion, P Peluso, KM Munson, ...
Nature Communications 12 (1), 1935, 2021
Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle
WY Low, R Tearle, R Liu, S Koren, A Rhie, DM Bickhart, BD Rosen, ...
Nature communications 11 (1), 2071, 2020
Human-specific tandem repeat expansion and differential gene expression during primate evolution
A Sulovari, R Li, PA Audano, D Porubsky, MR Vollger, GA Logsdon, ...
Proceedings of the National Academy of Sciences 116 (46), 23243-23253, 2019
Comparative Annotation Toolkit (CAT)—simultaneous clade and personal genome annotation
IT Fiddes, J Armstrong, M Diekhans, S Nachtweide, ZN Kronenberg, ...
Genome research 28 (7), 1029-1038, 2018
Molecular shifts in limb identity underlie development of feathered feet in two domestic avian species
ET Domyan, Z Kronenberg, CR Infante, AI Vickrey, SA Stringham, ...
elife 5, e12115, 2016
Epistatic and combinatorial effects of pigmentary gene mutations in the domestic pigeon
ET Domyan, MW Guernsey, Z Kronenberg, S Krishnan, RE Boissy, ...
Current Biology 24 (4), 459-464, 2014
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