Analysis of gene expression data using BRB-array tools R Simon, A Lam, MC Li, M Ngan, S Menenzes, Y Zhao Cancer informatics 3, 117693510700300022, 2007 | 826 | 2007 |
Design and analysis of DNA microarray investigations RM Simon, EL Korn, LM McShane, MD Radmacher, GW Wright, Y Zhao Springer, 2003 | 518 | 2003 |
Atomic structure of PDE4: insights into phosphodiesterase mechanism and specificity RX Xu, AM Hassell, D Vanderwall, MH Lambert, WD Holmes, MA Luther, ... Science 288 (5472), 1822-1825, 2000 | 439 | 2000 |
MicroRNA expression differentiates histology and predicts survival of lung cancer MT Landi, Y Zhao, M Rotunno, J Koshiol, H Liu, AW Bergen, M Rubagotti, ... Clinical Cancer Research 16 (2), 430-441, 2010 | 430 | 2010 |
Crystal structure of calcineurin–cyclophilin–cyclosporin shows common but distinct recognition of immunophilin–drug complexes Q Huai, HY Kim, Y Liu, Y Zhao, A Mondragon, JO Liu, H Ke Proceedings of the National Academy of Sciences 99 (19), 12037-12042, 2002 | 373 | 2002 |
Prospective molecular profiling of melanoma metastases suggests classifiers of immune responsiveness E Wang, LD Miller, GA Ohnmacht, S Mocellin, A Perez-Diez, D Petersen, ... Cancer research 62 (13), 3581-3586, 2002 | 317 | 2002 |
Identification of candidate T-cell epitopes and molecular mimics in chronic Lyme disease B Hemmer, B Gran, Y Zhao, A Marques, J Pascal, A Tzou, T Kondo, ... Nature medicine 5 (12), 1375-1382, 1999 | 289 | 1999 |
Novel technologies and emerging biomarkers for personalized cancer immunotherapy J Yuan, PS Hegde, R Clynes, PG Foukas, A Harari, TO Kleen, P Kvistborg, ... Journal for immunotherapy of cancer 4, 1-25, 2016 | 265 | 2016 |
Transcriptional patterns, biomarkers and pathways characterizing nasopharyngeal carcinoma of Southern China W Fang, X Li, Q Jiang, Z Liu, H Yang, S Wang, S Xie, Q Liu, T Liu, ... Journal of translational medicine 6, 1-13, 2008 | 244 | 2008 |
TPM, FPKM, or normalized counts? A comparative study of quantification measures for the analysis of RNA-seq data from the NCI patient-derived models repository Y Zhao, MC Li, MM Konaté, L Chen, B Das, C Karlovich, PM Williams, ... Journal of translational medicine 19 (1), 269, 2021 | 224 | 2021 |
A signature of immune function genes associated with recurrence-free survival in breast cancer patients ML Ascierto, M Kmieciak, MO Idowu, R Manjili, Y Zhao, M Grimes, ... Breast cancer research and treatment 131, 871-880, 2012 | 179 | 2012 |
HLA-DR15 molecules jointly shape an autoreactive T cell repertoire in multiple sclerosis J Wang, I Jelcic, L Mühlenbruch, V Haunerdinger, NC Toussaint, Y Zhao, ... Cell 183 (5), 1264-1281. e20, 2020 | 169 | 2020 |
Strengths and limitations of laboratory procedures for microRNA detection J Koshiol, E Wang, Y Zhao, F Marincola, MT Landi Cancer epidemiology, biomarkers & prevention 19 (4), 907-911, 2010 | 168 | 2010 |
Application of support vector machines for T-cell epitopes prediction Y Zhao, C Pinilla, D Valmori, R Martin, R Simon Bioinformatics 19 (15), 1978-1984, 2003 | 168 | 2003 |
How large a training set is needed to develop a classifier for microarray data? KK Dobbin, Y Zhao, RM Simon Clinical Cancer Research 14 (1), 108-114, 2008 | 148 | 2008 |
CXCR3/CCR5 pathways in metastatic melanoma patients treated with adoptive therapy and interleukin-2 D Bedognetti, TL Spivey, Y Zhao, L Uccellini, S Tomei, ME Dudley, ... British journal of cancer 109 (9), 2412-2423, 2013 | 147 | 2013 |
Crystal Structure Implies That Cyclophilin Predominantly Catalyzes the Trans to Cis Isomerization, Y Zhao, H Ke Biochemistry 35 (23), 7356-7361, 1996 | 133 | 1996 |
Common cancer biomarkers CF Basil, Y Zhao, K Zavaglia, P Jin, MC Panelli, S Voiculescu, ... Cancer research 66 (6), 2953-2961, 2006 | 122 | 2006 |
Combinatorial peptide libraries and biometric score matrices permit the quantitative analysis of specific and degenerate interactions between clonotypic TCR and MHC peptide ligands Y Zhao, B Gran, C Pinilla, S Markovic-Plese, B Hemmer, A Tzou, ... The Journal of Immunology 167 (4), 2130-2141, 2001 | 122 | 2001 |
BRB-ArrayTools Data Archive for human cancer gene expression: a unique and efficient data sharing resource Y Zhao, R Simon Cancer informatics 6, CIN. S448, 2008 | 119 | 2008 |