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Jiaxing CHEN
Jiaxing CHEN
Ph.D. of Computer Science, City University of Hong Kong
Verified email at my.cityu.edu.hk
Title
Cited by
Cited by
Year
Discrepant gut microbiota markers for the classification of obesity-related metabolic abnormalities
Q Zeng, D Li, Y He, Y Li, Z Yang, X Zhao, Y Liu, Y Wang, J Sun, X Feng, ...
Scientific reports 9 (1), 13424, 2019
2602019
DeepDRIM: a deep neural network to reconstruct cell-type-specific gene regulatory network using single-cell RNA-seq data
J Chen, CW Cheong, L Lan, X Zhou, J Liu, A Lyu, WK Cheung, L Zhang
Briefings in bioinformatics 22 (6), bbab325, 2021
292021
Parameterized BLOSUM matrices for protein alignment
D Song, J Chen, G Chen, N Li, J Li, J Fan, D Bu, SC Li
IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (3 …, 2014
232014
The genome variation and developmental transcriptome maps reveal genetic differentiation of skeletal muscle in pigs
Y Yang, J Yan, X Fan, J Chen, Z Wang, X Liu, G Yi, Y Liu, Y Niu, L Zhang, ...
PLoS Genetics 17 (11), e1009910, 2021
192021
Understanding horizontal gene transfer network in human gut microbiota
C Li, J Chen, SC Li
Gut Pathogens 12 (1), 1-20, 2020
192020
On triangle inequalities of correlation-based distances for gene expression profiles
J Chen, YK Ng, L Lin, X Zhang, S Li
BMC bioinformatics 24 (1), 40, 2023
11*2023
Association between metabolic status and gut microbiome in obese populations
Q Zeng, Z Yang, F Wang, D Li, Y Liu, D Wang, X Zhao, Y Li, Y Wang, ...
Microbial Genomics 7 (8), 2021
112021
dynDeepDRIM: a dynamic deep learning model to infer direct regulatory interactions using time-course single-cell gene expression data
Y Xu, J Chen, A Lyu, WK Cheung, L Zhang
Briefings in Bioinformatics 23 (6), bbac424, 2022
52022
Both simulation and sequencing data reveal coinfections with multiple SARS-CoV-2 variants in the COVID-19 pandemic
Y Li, Y Jiang, Z Li, Y Yu, J Chen, W Jia, YK Ng, F Ye, SC Li, B Shen
Computational and Structural Biotechnology Journal 20, 1389-1401, 2022
52022
KDiamend: a package for detecting key drivers in a molecular ecological network of disease
M Lyu, J Chen, Y Jiang, W Dong, Z Fang, S Li
BMC Systems Biology 12 (1), 89-99, 2018
52018
Deep learning for HGT insertion sites recognition
C Li, J Chen, SC Li
BMC genomics 21 (11), 1-18, 2020
32020
More accurate models for detecting gene-gene interactions from public expression compendia
L Zhang, JX Chen, SC Li
2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016
32016
A multimodal framework for detecting direct and indirect gene-gene interactions from large expression compendium
L Zhang, JX Chen, SC Li
bioRxiv, 680116, 2019
12019
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Articles 1–13