Jiaxing CHEN
Jiaxing CHEN
Ph.D. of Computer Science, City University of Hong Kong
Verified email at
Cited by
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Discrepant gut microbiota markers for the classification of obesity-related metabolic abnormalities
Q Zeng, D Li, Y He, Y Li, Z Yang, X Zhao, Y Liu, Y Wang, J Sun, X Feng, ...
Scientific reports 9 (1), 13424, 2019
DeepDRIM: a deep neural network to reconstruct cell-type-specific gene regulatory network using single-cell RNA-seq data
J Chen, CW Cheong, L Lan, X Zhou, J Liu, A Lyu, WK Cheung, L Zhang
Briefings in bioinformatics 22 (6), bbab325, 2021
Parameterized BLOSUM matrices for protein alignment
D Song, J Chen, G Chen, N Li, J Li, J Fan, D Bu, SC Li
IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (3 …, 2014
The genome variation and developmental transcriptome maps reveal genetic differentiation of skeletal muscle in pigs
Y Yang, J Yan, X Fan, J Chen, Z Wang, X Liu, G Yi, Y Liu, Y Niu, L Zhang, ...
PLoS Genetics 17 (11), e1009910, 2021
Understanding horizontal gene transfer network in human gut microbiota
C Li, J Chen, SC Li
Gut Pathogens 12 (1), 1-20, 2020
On triangle inequalities of correlation-based distances for gene expression profiles
J Chen, YK Ng, L Lin, X Zhang, S Li
BMC bioinformatics 24 (1), 40, 2023
Association between metabolic status and gut microbiome in obese populations
Q Zeng, Z Yang, F Wang, D Li, Y Liu, D Wang, X Zhao, Y Li, Y Wang, ...
Microbial Genomics 7 (8), 2021
dynDeepDRIM: a dynamic deep learning model to infer direct regulatory interactions using time-course single-cell gene expression data
Y Xu, J Chen, A Lyu, WK Cheung, L Zhang
Briefings in Bioinformatics 23 (6), bbac424, 2022
Both simulation and sequencing data reveal coinfections with multiple SARS-CoV-2 variants in the COVID-19 pandemic
Y Li, Y Jiang, Z Li, Y Yu, J Chen, W Jia, YK Ng, F Ye, SC Li, B Shen
Computational and Structural Biotechnology Journal 20, 1389-1401, 2022
KDiamend: a package for detecting key drivers in a molecular ecological network of disease
M Lyu, J Chen, Y Jiang, W Dong, Z Fang, S Li
BMC Systems Biology 12 (1), 89-99, 2018
Deep learning for HGT insertion sites recognition
C Li, J Chen, SC Li
BMC genomics 21 (11), 1-18, 2020
More accurate models for detecting gene-gene interactions from public expression compendia
L Zhang, JX Chen, SC Li
2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016
A multimodal framework for detecting direct and indirect gene-gene interactions from large expression compendium
L Zhang, JX Chen, SC Li
bioRxiv, 680116, 2019
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