| An integrated expression atlas of miRNAs and their promoters in human and mouse D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ... Nature biotechnology 35 (9), 872-878, 2017 | 618 | 2017 |
| Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle M Aranda, Y Li, YJ Liew, S Baumgarten, O Simakov, MC Wilson, J Piel, ... Scientific reports 6 (1), 39734, 2016 | 374 | 2016 |
| HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models IV Kulakovskiy, IE Vorontsov, IS Yevshin, AV Soboleva, AS Kasianov, ... Nucleic acids research 44 (D1), D116-D125, 2016 | 271 | 2016 |
| DDR: efficient computational method to predict drug–target interactions using graph mining and machine learning approaches RS Olayan, H Ashoor, VB Bajic Bioinformatics 34 (7), 1164-1173, 2018 | 251 | 2018 |
| DTiGEMS+: drug–target interaction prediction using graph embedding, graph mining, and similarity-based techniques MA Thafar, RS Olayan, H Ashoor, S Albaradei, VB Bajic, X Gao, ... Journal of Cheminformatics 12, 1-17, 2020 | 130 | 2020 |
| Graph embedding and unsupervised learning predict genomic sub-compartments from HiC chromatin interaction data H Ashoor, X Chen, W Rosikiewicz, J Wang, A Cheng, P Wang, Y Ruan, ... Nature communications 11 (1), 1173, 2020 | 75 | 2020 |
| DENdb: database of integrated human enhancers H Ashoor, D Kleftogiannis, A Radovanovic, VB Bajic Database 2015, bav085, 2015 | 61 | 2015 |
| HMCan: a method for detecting chromatin modifications in cancer samples using ChIP-seq data H Ashoor, A Herault, A Kamoun, F Radvanyi, VB Bajic, E Barillot, V Boeva Bioinformatics 29 (23), 2979-2986, 2013 | 60 | 2013 |
| A novel method for improved accuracy of transcription factor binding site prediction AM Khamis, O Motwalli, R Oliva, BR Jankovic, YA Medvedeva, H Ashoor, ... Nucleic acids research 46 (12), e72-e72, 2018 | 52 | 2018 |
| Plasma protein biomarkers for early prediction of lung cancer MPA Davies, T Sato, H Ashoor, L Hou, T Liloglou, R Yang, JK Field EBioMedicine 93, 2023 | 45 | 2023 |
| FARNA: knowledgebase of inferred functions of non-coding RNA transcripts T Alam, M Uludag, M Essack, A Salhi, H Ashoor, JB Hanks, C Kapfer, ... Nucleic acids research 45 (5), 2838-2848, 2017 | 41 | 2017 |
| Dragon TIS Spotter: an Arabidopsis-derived predictor of translation initiation sites in plants A Magana-Mora, H Ashoor, BR Jankovic, A Kamau, K Awara, ... Bioinformatics 29 (1), 117-118, 2013 | 22 | 2013 |
| HMCan-diff: a method to detect changes in histone modifications in cells with different genetic characteristics H Ashoor, C Louis-Brennetot, I Janoueix-Lerosey, VB Bajic, V Boeva Nucleic acids research 45 (8), e58-e58, 2017 | 18 | 2017 |
| Computational drug-target interaction prediction based on graph embedding and graph mining MA Thafar, S Albaradie, RS Olayan, H Ashoor, M Essack, VB Bajic Proceedings of the 2020 10th international conference on bioscience …, 2020 | 12 | 2020 |
| Recognition of translation initiation sites in Arabidopsis thaliana H Ashoor, AM Mora, K Awara, BR Jankovic, R Chowdhary, JAC Archer, ... Systemic approaches in bioinformatics and computational systems biology …, 2012 | 12 | 2012 |
| epihet for intra-tumoral epigenetic heterogeneity analysis and visualization X Chen, H Ashoor, R Musich, J Wang, M Zhang, C Zhang, M Lu, S Li Scientific Reports 11 (1), 376, 2021 | 8 | 2021 |
| TELS: a novel computational framework for identifying motif signatures of transcribed enhancers D Kleftogiannis, H Ashoor, VB Bajic Genomics, Proteomics & Bioinformatics 16 (5), 332-341, 2018 | 5 | 2018 |
| Aströ m D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor G., Babina, M., Bertin, N., Burroughs, AM, et al, 872-878, 2017 | 5 | 2017 |
| Genome informatics AK Kesarwani, A Malhotra, A Srivastava, G Ananda, H Ashoor, P Kumar, ... Academic Press, 2019 | 2 | 2019 |
| Discovery of prognostic and treatment predictive biomarkers in recently diagnosed type 1 diabetes patients treated with anti TNFα S Kostense, JM Klap, H Ashoor, R Yang, GJ Weverling, K Sweet, ... medRxiv, 2023.05. 29.23290668, 2023 | 1 | 2023 |
Rawan OlayanBioinformatics Scientist at Harvard UniversityVerified email at kaust.edu.sa
