A targeted proteomics–based pipeline for verification of biomarkers in plasma JR Whiteaker, C Lin, J Kennedy, L Hou, M Trute, I Sokal, P Yan, ... Nature biotechnology 29 (7), 625-634, 2011 | 402 | 2011 |
Elafin is a biomarker of graft-versus-host disease of the skin S Paczesny, TM Braun, JE Levine, J Hogan, J Crawford, B Coffing, ... Science translational medicine 2 (13), 13ra2-13ra2, 2010 | 287 | 2010 |
Complementary Structural Information from a Tryptic N-Linked Glycopeptide via Electron Transfer Ion/Ion Reactions and Collision-Induced Dissociation JM Hogan, SJ Pitteri, PA Chrisman, SA McLuckey Journal of proteome research 4 (2), 628-632, 2005 | 222 | 2005 |
Electron Transfer Ion/Ion Reactions in a Three-Dimensional Quadrupole Ion Trap: Reactions of Doubly and Triply Protonated Peptides with SO2•- SJ Pitteri, PA Chrisman, JM Hogan, SA McLuckey Analytical chemistry 77 (6), 1831-1839, 2005 | 200 | 2005 |
Electron transfer versus proton transfer in gas-phase ion/ion reactions of polyprotonated peptides HP Gunawardena, M He, PA Chrisman, SJ Pitteri, JM Hogan, ... Journal of the American Chemical Society 127 (36), 12627-12639, 2005 | 185 | 2005 |
A proteomics platform combining depletion, multi-lectin affinity chromatography (M-LAC), and isoelectric focusing to study the breast cancer proteome Z Zeng, M Hincapie, SJ Pitteri, S Hanash, J Schalkwijk, JM Hogan, ... Analytical chemistry 83 (12), 4845-4854, 2011 | 148 | 2011 |
Gas-phase concentration, purification, and identification of whole proteins from complex mixtures GE Reid, H Shang, JM Hogan, GU Lee, SA McLuckey Journal of the American Chemical Society 124 (25), 7353-7362, 2002 | 141 | 2002 |
SO 2−· electron transfer ion/ion reactions with disulfide linked polypeptide ions PA Chrisman, SJ Pitteri, JM Hogan, SA McLuckey Journal of the American Society for Mass Spectrometry 16 (7), 1020-1030, 2005 | 130 | 2005 |
Randomized sequence databases for tandem mass spectrometry peptide and protein identification R Higdon, JM Hogan, GV Belle, E Kolker Omics: a journal of integrative biology 9 (4), 364-379, 2005 | 107 | 2005 |
Charge state dependent collision‐induced dissociation of native and reduced porcine elastase JM Hogan, SA McLuckey Journal of mass spectrometry 38 (3), 245-256, 2003 | 80 | 2003 |
Metabolomic profiling of urine: response to a randomised, controlled feeding study of select fruits and vegetables, and application to an observational study DH May, SL Navarro, I Ruczinski, J Hogan, Y Ogata, Y Schwarz, L Levy, ... British Journal of Nutrition 110 (10), 1760-1770, 2013 | 74 | 2013 |
Protein identification and expression analysis using mass spectrometry E Kolker, R Higdon, JM Hogan Trends in microbiology 14 (5), 229-235, 2006 | 73 | 2006 |
Whole protein dissociation in a quadrupole ion trap: identification of an a priori unknown modified protein R Amunugama, JM Hogan, KA Newton, SA McLuckey Analytical chemistry 76 (3), 720-727, 2004 | 64 | 2004 |
The development of an integrated platform to identify breast cancer glycoproteome changes in human serum Z Zeng, M Hincapie, BB Haab, S Hanash, SJ Pitteri, S Kluck, JM Hogan, ... Journal of chromatography A 1217 (19), 3307-3315, 2010 | 59 | 2010 |
Investigating neoplastic progression of ulcerative colitis with label-free comparative proteomics D May, S Pan, DA Crispin, K Lai, MP Bronner, J Hogan, DM Hockenbery, ... Journal of proteome research 10 (1), 200-209, 2011 | 50 | 2011 |
Phosphorylation site identification via ion trap tandem mass spectrometry of whole protein and peptide ions: bovine α-crystallin A chain JM Hogan, SJ Pitteri, SA McLuckey Analytical chemistry 75 (23), 6509-6516, 2003 | 48 | 2003 |
Experimental standards for high-throughput proteomics JM Hogan, R Higdon, E Kolker Omics: a journal of integrative biology 10 (2), 152-157, 2006 | 28 | 2006 |
Experiment-specific estimation of peptide identification probabilities using a randomized database R Higdon, JM Hogan, N Kolker, G Van Belle, E Kolker Omics: a journal of integrative biology 11 (4), 351-366, 2007 | 25 | 2007 |
Design and characterization of mouse IgG1 and IgG2a bispecific antibodies for use in syngeneic models F Wang, JC Tsai, JH Davis, B Chau, J Dong, SM West, JM Hogan, ... Mabs 12 (1), e1685350, 2020 | 22 | 2020 |
Charge state estimation for tandem mass spectrometry proteomics JM Hogan, R Higdon, N Kolker, E Kolker Omics: a journal of integrative biology 9 (3), 233-250, 2005 | 21 | 2005 |