Stephan Waack

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Mario StankeProfessor of Bioinformatics, University of GreifswaldVerified email at uni-greifswald.de
Burkhard MorgensternProfessor of Bioinformatics, University of GöttingenVerified email at gwdg.de
Martin KollmarVerified email at nmr.mpibpc.mpg.de
Jens GrabowskiProfessor of Computer Science, Georg-August-Universität GöttingenVerified email at informatik.uni-goettingen.de
Steffen HerboldUniversity of PassauVerified email at uni-passau.de
Mehmet GültasFaculty of Agriculture, South Westphalia University of Applied SciencesVerified email at informatik.uni-goettingen.de
Rainer MerklUniversität Regensburg (retired)Verified email at ur.de
Peter MeinickeSenior Scientist, University of GoettingenVerified email at gwdg.de
W. Florian FrickeProfessor, University of Hohenheim, Stuttgart, GermanyVerified email at uni-hohenheim.de
Edgar WingendergeneXplain GmbH, Institute of Bioinformatics/Univ. Med. Center GöttingenVerified email at genexplain.com
Verena HerboldResearcher, University of GoettingenVerified email at cs.uni-goettingen.de
Björn HammesfahrVerified email at nmr.mpibpc.mpg.de
Dominic SimmGeorg-August-Universität GöttingenVerified email at cs.uni-goettingen.de
Philipp WoelfelUniversity of CalgaryVerified email at ucalgary.ca
Jürgen DixProfessor, Chair for Artificial Intelligence, TU ClausthalVerified email at tu-clausthal.de
Tobias AhlbrechtPhD Candidate, Clausthal University of TechnologyVerified email at tu-clausthal.de
Helmut NeukirchenProfessor of Computer Science and Software Engineering, University of IcelandVerified email at hi.is
Sven JägerRheinland-Pfälzische Technische Universität (RPTU)Verified email at rptu.de
Braus, GerhardProfessor for Microbiology and Genetics, University of GoettingenVerified email at gwdg.de
Michael HabeckJena University Hospital, MPI for Biophysical ChemistryVerified email at uni-jena.de

Stephan Waack

Professor für Informatik, Universität Göttingen

Verified email at informatik.uni-goettingen.de

Complexity Theory Bioinformatics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
AUGUSTUS: ab initio prediction of alternative transcripts M Stanke, O Keller, I Gunduz, A Hayes, S Waack, B Morgenstern Nucleic acids research 34 (suppl_2), W435-W439, 2006	2084	2006
Gene prediction with a hidden Markov model and a new intron submodel M Stanke, S Waack Bioinformatics-Oxford 19 (2), 215-225, 2003	1734	2003
AUGUSTUS: a web server for gene finding in eukaryotes M Stanke, R Steinkamp, S Waack, B Morgenstern Nucleic acids research 32 (suppl_2), W309-W312, 2004	1290	2004
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources M Stanke, O Schöffmann, B Morgenstern, S Waack BMC bioinformatics 7, 1-11, 2006	1215	2006
A novel hybrid gene prediction method employing protein multiple sequence alignments O Keller, M Kollmar, M Stanke, S Waack Bioinformatics 27 (6), 757-763, 2011	543	2011
Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models S Waack, O Keller, R Asper, T Brodag, C Damm, WF Fricke, K Surovcik, ... BMC bioinformatics 7, 1-12, 2006	417	2006
Scipio: using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species O Keller, F Odronitz, M Stanke, M Kollmar, S Waack BMC bioinformatics 9, 1-12, 2008	145	2008
Calculation and optimization of thresholds for sets of software metrics S Herbold, J Grabowski, S Waack Empirical Software Engineering 16, 812-841, 2011	111	2011
Separating the eraser Turing machine classes Le, NLe, co-NLe and Pe M Krause, C Meinel, S Waack Theoretical Computer Science 86 (2), 267-275, 1991	92	1991
Bioinformatik interaktiv R Merkl, S Waack John Wiley & Sons, 2009	80	2009
Variation ranks of communication matrices and lower bounds for depth two circuits having symmetric gates with unbounded fan-in M Krause, S Waack [1991] Proceedings 32nd Annual Symposium of Foundations of Computer Science …, 1991	60	1991
On the descriptive and algorithmic power of parity ordered binary decision diagrams S Waack Annual Symposium on Theoretical Aspects of Computer Science, 201-212, 1997	52	1997
Cross-species protein sequence and gene structure prediction with fine-tuned Webscipio 2.0 and Scipio K Hatje, O Keller, B Hammesfahr, H Pillmann, S Waack, M Kollmar BMC research notes 4, 1-20, 2011	45	2011
Improved bug reporting and reproduction through non-intrusive gui usage monitoring and automated replaying S Herbold, J Grabowski, S Waack, U Bünting 2011 IEEE Fourth International Conference on Software Testing, Verification …, 2011	38	2011
WebScipio: an online tool for the determination of gene structures using protein sequences F Odronitz, H Pillmann, O Keller, S Waack, M Kollmar BMC genomics 9, 1-13, 2008	36	2008
On relations between counting communication complexity classes C Damm, M Krause, C Meinel, S Waack Journal of computer and System Sciences 69 (2), 259-280, 2004	29	2004
GenePainter: a fast tool for aligning gene structures of eukaryotic protein families, visualizing the alignments and mapping gene structures onto protein structures B Hammesfahr, F Odronitz, S Mühlhausen, S Waack, M Kollmar BMC bioinformatics 14, 1-11, 2013	28	2013
Algebraic and topological properties of finite partially ordered sets L Budach, B Graw, C Meinel, S Waack Teubner-texte zur Mathematik 109, 1988	28*	1988
Demonstrating non-inferiority of easy interpretable methods for insolvency prediction L Obermann, S Waack Expert Systems with Applications 42 (23), 9117-9128, 2015	27	2015
PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information C Meckbach, R Tacke, X Hua, S Waack, E Wingender, M Gültas BMC bioinformatics 16, 1-21, 2015	27	2015

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