David Osumi-Sutherland

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Christopher J MungallLawrence Berkeley National LaboratoryVerified email at lbl.gov
Laurel A. RafteryUniversity of Nevada, Las VegasVerified email at unlv.edu
Alexander D. DiehlAssociate Professor of Biomedical Informatics, University at BuffaloVerified email at buffalo.edu
Susan TweedieEMBL-EBIVerified email at ebi.ac.uk
Peter McQuiltonProject Coordinator FAIRsharing.orgVerified email at oerc.ox.ac.uk
Barry SmithProfessor of Philosophy, Biomedical Informatics, and Computer Science, University at BuffaloVerified email at buffalo.edu
Marta CostaDepartment of Zoology, Downing Street, University of Cambridge Cambridge, CB2 3EJ, UKVerified email at cam.ac.uk
Ramona L. WallsBio5 University of Arizona, Critical Path InstituteVerified email at c-path.org
Fabian NeuhausOtto von Guericke University MagdeburgVerified email at ovgu.de
Wasila DahdulUniversity California, IrvineVerified email at uci.edu
Paula M. MabeeBattelle, National Ecological Observatory Network (NEON)Verified email at battelleecology.org
Greg JefferisMRC Laboratory of Molecular Biology, CambridgeVerified email at mrc-lmb.cam.ac.uk
Ray StefancsikEuropean Bioinformatics Institute (EMBL-EBI)Verified email at ebi.ac.uk
Robert WisotzkeyAdjunct Faculity in Biological Sciences, California State University East BayVerified email at csueastbay.edu
Cahir O'KaneDepartment of Genetics, University of CambridgeVerified email at gen.cam.ac.uk
Jane LomaxSciBiteVerified email at scibite.com
Robert CourtUniversity of EdinburghVerified email at ed.ac.uk
Robert HoehndorfKing Abdullah University of Science and TechnologyVerified email at kaust.edu.sa
Caroline BeckUniversity of OtagoVerified email at otago.ac.nz
Mark Longair(Previously) Postdoctoral researcher, Institute of Neuroinformatics, Uni / ETH ZürichVerified email at longair.net

David Osumi-Sutherland

European Bioinformatics Institute

Verified email at ebi.ac.uk

Artificial Intelligence Ontologies Semantic web Drosophila Neuroscience


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The gene ontology resource: 20 years and still GOing strong Gene Ontology Consortium Nucleic acids research 47 (D1), D330-D338, 2019	3999	2019
Expansion of the Gene Ontology knowledgebase and resources Gene Ontology Consortium Nucleic acids research 45 (D1), D331-D338, 2017	1826*	2017
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource E Sollis, A Mosaku, A Abid, A Buniello, M Cerezo, L Gil, T Groza, O Güneş, ... Nucleic acids research 51 (D1), D977-D985, 2023	1101	2023
FlyBase: enhancing Drosophila Gene Ontology annotations S Tweedie, M Ashburner, K Falls, P Leyland, P McQuilton, S Marygold, ... Nucleic acids research 37 (suppl_1), D555-D559, 2009	895	2009
SynGO: an evidence-based, expert-curated knowledge base for the synapse F Koopmans, P van Nierop, M Andres-Alonso, A Byrnes, T Cijsouw, ... Neuron 103 (2), 217-234. e4, 2019	771	2019
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources S Köhler, L Carmody, N Vasilevsky, JOB Jacobsen, D Danis, JP Gourdine, ... Nucleic acids research 47 (D1), D1018-D1027, 2019	739	2019
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly H Li, J Janssens, M De Waegeneer, SS Kolluru, K Davie, V Gardeux, ... Science 375 (6584), eabk2432, 2022	530	2022
TGF-β Family Signal Transduction in Drosophila Development: From Mad to Smads LA Raftery, DJ Sutherland Developmental biology 210 (2), 251-268, 1999	466	1999
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability AD Diehl, TF Meehan, YM Bradford, MH Brush, WM Dahdul, DS Dougall, ... Journal of biomedical semantics 7, 1-10, 2016	290	2016
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ... Nucleic acids research 48 (D1), D704-D715, 2020	245	2020
Finding our way through phenotypes AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ... PLoS biology 13 (1), e1002033, 2015	238	2015
Medea is a Drosophila Smad4 homolog that is differentially required to potentiate DPP responses RG Wisotzkey, A Mehra, DJ Sutherland, LL Dobens, X Liu, C Dohrmann, ... Development 125 (8), 1433-1445, 1998	221	1998
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies R Jackson, N Matentzoglu, JA Overton, R Vita, JP Balhoff, PL Buttigieg, ... Database 2021, baab069, 2021	187	2021
Expression Atlas update: gene and protein expression in multiple species P Moreno, S Fexova, N George, JR Manning, Z Miao, S Mohammed, ... Nucleic acids research 50 (D1), D129-D140, 2022	159	2022
CARO–the common anatomy reference ontology MA Haendel, F Neuhaus, D Osumi-Sutherland, PM Mabee, JLV Mejino Jr, ... Anatomy ontologies for bioinformatics: principles and practice, 327-349, 2008	133	2008
The Virtual Fly Brain browser and query interface N Milyaev, D Osumi-Sutherland, S Reeve, N Burton, RA Baldock, ... Bioinformatics 28 (3), 411-415, 2012	132	2012
Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems PD Thomas, DP Hill, H Mi, D Osumi-Sutherland, K Van Auken, S Carbon, ... Nature genetics 51 (10), 1429-1433, 2019	116	2019
Anatomical structures, cell types and biomarkers of the Human Reference Atlas K Börner, SA Teichmann, EM Quardokus, JC Gee, K Browne, ... Nature cell biology 23 (11), 1117-1128, 2021	107	2021
Cell type ontologies of the Human Cell Atlas D Osumi-Sutherland, C Xu, M Keays, AP Levine, PV Kharchenko, ... Nature cell biology 23 (11), 1129-1135, 2021	103	2021
Stepwise formation of a SMAD activity gradient during dorsal-ventral patterning of the Drosophila embryo DJ Sutherland, M Li, X Liu, R Stefancsik, LA Raftery Oxford University Press for The Company of Biologists Limited 130 (23), 5705 …, 2003	94	2003

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