Alexa Patyshakuliyeva
Alexa Patyshakuliyeva
Postdoctoral fellow, Westerdijk Fungal Biodiversity Institute
Verified email at - Homepage
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The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ...
Science 336 (6089), 1715-1719, 2012
Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche
E Morin, A Kohler, AR Baker, M Foulongne-Oriol, V Lombard, LG Nagye, ...
Proceedings of the National Academy of Sciences 109 (43), 17501-17506, 2012
Bacillus subtilis attachment to Aspergillus niger hyphae results in mutually altered metabolism
I Benoit, MH van den Esker, A Patyshakuliyeva, DJ Mattern, F Blei, ...
Environmental microbiology 17 (6), 2099-2113, 2015
The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown
A Levasseur, A Lomascolo, O Chabrol, FJ Ruiz-Dueñas, E Boukhris-Uzan, ...
BMC genomics 15, 1-24, 2014
Uncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle
A Patyshakuliyeva, H Post, M Zhou, E Jurak, AJR Heck, KS Hildén, ...
Environmental microbiology 17 (8), 3098-3109, 2015
Improving cellulase production by Aspergillus niger using adaptive evolution
A Patyshakuliyeva, M Arentshorst, IE Allijn, AFJ Ram, RP de Vries, ...
Biotechnology letters 38, 969-974, 2016
Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus
A Patyshakuliyeva, E Jurak, A Kohler, A Baker, E Battaglia, W De Bruijn, ...
BMC genomics 14, 1-14, 2013
Macroalgae derived fungi have high abilities to degrade algal polymers
A Patyshakuliyeva, DL Falkoski, A Wiebenga, K Timmermans, ...
Microorganisms 8 (1), 52, 2019
An improved and reproducible protocol for the extraction of high quality fungal RNA from plant biomass substrates
A Patyshakuliyeva, MR Mäkelä, OM Sietiö, RP de Vries, KS Hildén
Fungal Genetics and Biology 72, 201-206, 2014
Compost grown Agaricus bisporus lacks the ability to degrade and consume highly substituted xylan fragments
E Jurak, A Patyshakuliyeva, RP De Vries, H Gruppen, MA Kabel
PloS one 10 (8), e0134169, 2015
The physiology of Agaricus bisporus in semi-commercial compost cultivation appears to be highly conserved among unrelated isolates
MVA Pontes, A Patyshakuliyeva, H Post, E Jurak, K Hildén, M Altelaar, ...
Fungal Genetics and Biology 112, 12-20, 2018
The current biotechnological status and potential of plant and algal biomass degrading/modifying enzymes from ascomycete fungi
RP de Vries, A Patyshakuliyeva, S Garrigues, S Agarwal-Jans
Grand challenges in fungal biotechnology, 81-120, 2020
The Paleozoic origin of enzymatic mechanisms for decay of lignin reconstructed using 31 fungal genomes
D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ...
Science 336 (6089), 1715-1719, 2012
Accumulation of recalcitrant xylan in mushroom-compost is due to a lack of xylan substituent removing enzyme activities of Agaricus bisporus
E Jurak, A Patyshakuliyeva, D Kapsokalyvas, L Xing, ...
Carbohydrate polymers 132, 359-368, 2015
Unraveling the mystery of commercial cultivation of Agaricus bisporus: plant biomass utilization and its effect on mushroom production
A Patyshakuliyeva
Biodegradation of carbohydrates during the formation of Agaricus bisporus compost
A Patyshakuliyeva, RP De Vries
Proceedings of the 7th International Conference on Mushroom Biology and …, 2011
Evolutionary adaptation to generate mutants
RP de Vries, R Lubbers, A Patyshakuliyeva, A Wiebenga, I Benoit-Gelber
Fungal Genomics: Methods and Protocols, 133-137, 2018
SpataforaJosephBotanyPlantPathologyPaleozoicOriginEnzymatic. pdf
D Floudas, M Binder, R Riley, K Barry, RA Blanchette, B Henrissat, ...
Fate of lignin and substituted xylan during commercial cultivation of Agaricus bisporus
M Kabel, E Jurak, A Patyshakuliyeva, R de Vries, H Gruppen
Science and cultivation of edible fungi: Proceedings of the XIXth …, 2016
How (post-) genomic insights can provide new leads for improvements of mushroom cultivation
A Patyshakuliyeva, H Post, M Zhou, E Jurak, A Heck, KS Hildén, M Kabel, ...
Science and Cultivation of Edible Fungi: Proceedings of the International …, 2016
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