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Vijay Srinivasan
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The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis
TM Walker, P Miotto, CU Köser, PW Fowler, J Knaggs, Z Iqbal, M Hunt, ...
The Lancet Microbe 3 (4), e265-e273, 2022
1432022
Application of machine learning techniques to tuberculosis drug resistance analysis.
CDW Kouchaki S, Yang Y, Walker TM, Sarah Walker A, Wilson D, Peto TEA
Bioinformatics 35 (13), 2276-2282, 2019
792019
Validating a 14-drug microtiter plate containing bedaquiline and delamanid for large-scale research susceptibility testing of Mycobacterium tuberculosis
PMV Rancoita, F Cugnata, AL Gibertoni Cruz, E Borroni, SJ Hoosdally, ...
Antimicrobial agents and chemotherapy 62 (9), 10.1128/aac. 00344-18, 2018
762018
A data compendium associating the genomes of 12,289 Mycobacterium tuberculosis isolates with quantitative resistance phenotypes to 13 antibiotics
CRyPTIC Consortium
PLoS biology 20 (8), e3001721, 2022
492022
Epidemiological cut-off values for a 96-well broth microdilution plate for high-throughput research antibiotic susceptibility testing of M. tuberculosis
CRyPTIC Consortium
European Respiratory Journal 60 (4), 2022
452022
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis
Y Yang, TM Walker, AS Walker, DJ Wilson, TEA Peto, DW Crook, ...
Bioinformatics 35 (18), 3240-3249, 2019
442019
Influence of Stress and Antibiotic Resistance on Cell-Length Distribution in Mycobacterium tuberculosis Clinical Isolates
S Vijay, DN Vinh, HT Hai, VTN Ha, VTM Dung, TD Dinh, HN Nhung, ...
Frontiers in Microbiology 8, 2296, 2017
432017
Ultrastructural Analysis of Cell Envelope and Accumulation of Lipid Inclusions in Clinical Mycobacterium tuberculosis Isolates from Sputum, Oxidative Stress, and …
S Vijay, HT Hai, DDA Thu, E Johnson, A Pielach, NH Phu, GE Thwaites, ...
Frontiers in Microbiology 8, 2681, 2018
412018
Asymmetric cell division in Mycobacterium tuberculosis and its unique features
S Vijay, M Nagaraja, J Sebastian, P Ajitkumar
Archives of microbiology 196, 157-168, 2014
392014
Mycobacterial cultures contain cell size and density specific sub-populations of cells with significant differential susceptibility to antibiotics, oxidative and nitrite stress
S Vijay, RR Nair, D Sharan, K Jakkala, N Mukkayyan, S Swaminath, ...
Frontiers in Microbiology 8, 463, 2017
382017
Virulence of Mycobacterium tuberculosis Clinical Isolates Is Associated With Sputum Pre-treatment Bacterial Load, Lineage, Survival in Macrophages, and …
TTB Tram, HN Nhung, S Vijay, HT Hai, DDA Thu, VTN Ha, TD Dinh, ...
Frontiers in cellular and infection microbiology 8, 417, 2018
342018
Unveiling unusual features of formation of septal partition and constriction in mycobacteria—an ultrastructural study
S Vijay, D Anand, P Ajitkumar
Journal of bacteriology 194 (3), 702-707, 2012
312012
GenomegaMap: Within-Species Genome-Wide dN/dS Estimation from over 10,000 Genomes
DJ Wilson
Molecular biology and evolution 37 (8), 2450-2460, 2020
292020
Highly deviated asymmetric division in very low proportion of mycobacterial mid-log phase cells
S Vijay, N Mukkayyan, P Ajitkumar
The Open Microbiology Journal 8, 40, 2014
292014
Deciphering bedaquiline and clofazimine resistance in tuberculosis: an evolutionary medicine approach
L Sonnenkalb, J Carter, A Spitaleri, Z Iqbal, M Hunt, K Malone, C Utpatel, ...
Biorxiv, 2021.03. 19.436148, 2021
202021
Quantitative measurement of antibiotic resistance in Mycobacterium tuberculosis reveals genetic determinants of resistance and susceptibility in a target gene …
CRyPTIC Consortium, JJ Carter
bioRxiv, 2021.09. 14.460353, 2021
17*2021
Minos: variant adjudication and joint genotyping of cohorts of bacterial genomes
M Hunt, B Letcher, KM Malone, G Nguyen, MB Hall, RM Colquhoun, ...
Genome Biology 23 (1), 147, 2022
162022
Sources of multidrug resistance in patients with previous isoniazid-resistant tuberculosis identified using whole genome sequencing: A longitudinal cohort study
V Srinivasan, VTN Ha, DN Vinh, PVK Thai, DTM Ha, NH Lan, HT Hai, ...
Clinical Infectious Diseases 71 (10), e532-e539, 2020
162020
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis
L Sonnenkalb, JJ Carter, A Spitaleri, Z Iqbal, M Hunt, KM Malone, ...
The Lancet Microbe 4 (5), e358-e368, 2023
142023
A crowd of BashTheBug volunteers reproducibly and accurately measure the minimum inhibitory concentrations of 13 antitubercular drugs from photographs of 96-well broth …
PW Fowler, C Wright, H Spiers, T Zhu, EML Baeten, SW Hoosdally, ...
Elife 11, e75046, 2022
102022
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