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David A. W. Soergel
David A. W. Soergel
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Title
Cited by
Cited by
Year
Gemini: a family of highly capable multimodal models
G Team, R Anil, S Borgeaud, JB Alayrac, J Yu, R Soricut, J Schalkwyk, ...
arXiv preprint arXiv:2312.11805, 2023
21462023
The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families
S Yooseph, G Sutton, DB Rusch, AL Halpern, SJ Williamson, ...
PLoS biology 5 (3), e16, 2007
10202007
Gemini 1.5: Unlocking multimodal understanding across millions of tokens of context
G Team, P Georgiev, VI Lei, R Burnell, L Bai, A Gulati, G Tanzer, ...
arXiv preprint arXiv:2403.05530, 2024
671*2024
Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences
DAW Soergel, N Dey, R Knight, SE Brenner
The ISME journal 6 (7), 1440-1444, 2012
4432012
The coupling of alternative splicing and nonsense-mediated mRNA decay
LF Lareau, AN Brooks, DAW Soergel, Q Meng, SE Brenner
Alternative splicing in the Postgenomic Era, 190-211, 2007
2812007
Tensorflow. js: Machine learning for the web and beyond
D Smilkov, N Thorat, Y Assogba, C Nicholson, N Kreeger, P Yu, S Cai, ...
Proceedings of Machine Learning and Systems 1, 309-321, 2019
2322019
Association of gut microbiota with post-operative clinical course in Crohn’s disease
N Dey, DAW Soergel, S Repo, SE Brenner
BMC gastroenterology 13, 1-11, 2013
1612013
Rampant software errors may undermine scientific results
DAW Soergel
F1000Research 3, 303, 2015
612015
Regulation of gene expression by coupling of alternative splicing and NMD
DAW Soergel, LF Lareau, SE Brenner
Nonsense-mediated mRNA decay, 175-196, 2006
422006
Open Scholarship and Peer Review: a Time for Experimentation
D Soergel, A Saunders, A McCallum
362013
Tensorflow estimators: Managing simplicity vs. flexibility in high-level machine learning frameworks
HT Cheng, Z Haque, L Hong, M Ispir, C Mewald, I Polosukhin, ...
Proceedings of the 23rd ACM SIGKDD international conference on knowledge …, 2017
332017
Tensorflow. js: Machine learning for the web and beyond. arXiv 2019
D Smilkov, N Thorat, Y Assogba, A Yuan, N Kreeger, P Yu, K Zhang, ...
arXiv preprint arXiv:1901.05350, 1901
121901
TensorFlow Estimators: Managing Simplicity vs. Flexibility in High-Level Machine Learning Frameworks
C Xia, C Mewald, D Sculley, D Soergel, G Roumpos, HT Cheng, ...
SIGKDD, 1763
31763
Monod, a tool to support collaborative modeling of biological processes
D Soergel, B George, R Morgan-Linial, R Brent, D Endy
Unpublished manuscript, Molecular Sciences Institute, Berkeley, California, USA, 2003
22003
Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences: Supplementary Materials
DAW Soergel, N Dey, R Knight, SE Brenner
12011
Computational Methods for Evaluating Microbial Diversity
DAW Soergel
University of California, Berkeley, 2010
2010
MONOD, a Collaborative Tool for Manipulating Biological Knowledge
D Soergel, K Choi, T Thomson, J Doane, B George, R Morgan-Linial, ...
2008
The coupling of alternative splicing and nonsense-mediated mRNA
LF Lareau, AN Brooks, DAW Soergel
ALTERNATIVE SPLICING IN THE POSTGENOMIC ERA, 623, 2007
2007
Supplementary material for “Association of Gut Microbiota with Post-operative Clinical Course in Crohn’s Disease”
N Dey, DAW Soergel, S Repo, SE Brenner
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Articles 1–19