| Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017 | 853 | 2017 |
| Uncovering Earth’s virome D Paez-Espino, EA Eloe-Fadrosh, GA Pavlopoulos, AD Thomas, ... Nature 536 (7617), 425-430, 2016 | 691 | 2016 |
| IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes IMA Chen, K Chu, K Palaniappan, M Pillay, A Ratner, J Huang, ... Nucleic acids research 47 (D1), D666-D677, 2019 | 586 | 2019 |
| Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359-367, 2018 | 293 | 2018 |
| Minimum information about an uncultivated virus genome (MIUViG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29-37, 2019 | 217 | 2019 |
| A genomic catalog of Earth’s microbiomes S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ... Nature biotechnology 39 (4), 499-509, 2021 | 210 | 2021 |
| 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life S Mukherjee, R Seshadri, NJ Varghese, EA Eloe-Fadrosh, ... Nature biotechnology 35 (7), 676-683, 2017 | 203 | 2017 |
| The human microbiome: from symbiosis to pathogenesis EA Eloe-Fadrosh, DA Rasko Annual review of medicine 64, 145, 2013 | 201 | 2013 |
| Metagenomics uncovers gaps in amplicon-based detection of microbial diversity EA Eloe-Fadrosh, NN Ivanova, T Woyke, NC Kyrpides Nature Microbiology 1 (4), 1-4, 2016 | 179 | 2016 |
| CheckV assesses the quality and completeness of metagenome-assembled viral genomes S Nayfach, AP Camargo, F Schulz, E Eloe-Fadrosh, S Roux, NC Kyrpides Nature biotechnology 39 (5), 578-585, 2021 | 169 | 2021 |
| Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity S Roux, JB Emerson, EA Eloe-Fadrosh, MB Sullivan PeerJ 5, e3817, 2017 | 160 | 2017 |
| The IMG/M data management and analysis system v. 6.0: new tools and advanced capabilities IMA Chen, K Chu, K Palaniappan, A Ratner, J Huang, M Huntemann, ... Nucleic acids research 49 (D1), D751-D763, 2021 | 159 | 2021 |
| Compositional differences in particle‐associated and free‐living microbial assemblages from an extreme deep‐ocean environment EA Eloe, CN Shulse, DW Fadrosh, SJ Williamson, EE Allen, DH Bartlett Environmental microbiology reports 3 (4), 449-458, 2011 | 155 | 2011 |
| Functional dynamics of the gut microbiome in elderly people during probiotic consumption EA Eloe-Fadrosh, A Brady, J Crabtree, EF Drabek, B Ma, A Mahurkar, ... MBio 6 (2), e00231-15, 2015 | 129 | 2015 |
| Giant virus diversity and host interactions through global metagenomics F Schulz, S Roux, D Paez-Espino, S Jungbluth, DA Walsh, VJ Denef, ... Nature 578 (7795), 432-436, 2020 | 127 | 2020 |
| IMG/VR v. 2.0: an integrated data management and analysis system for cultivated and environmental viral genomes D Paez-Espino, S Roux, IMA Chen, K Palaniappan, A Ratner, K Chu, ... Nucleic acids research 47 (D1), D678-D686, 2019 | 123 | 2019 |
| Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes S Roux, M Krupovic, RA Daly, AL Borges, S Nayfach, F Schulz, A Sharrar, ... Nature microbiology 4 (11), 1895-1906, 2019 | 118 | 2019 |
| Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs EA Eloe-Fadrosh, D Paez-Espino, J Jarett, PF Dunfield, BP Hedlund, ... Nature communications 7 (1), 1-10, 2016 | 118 | 2016 |
| Aerosol Mycobacterium tuberculosis infection causes rapid loss of diversity in gut microbiota K Winglee, E Eloe-Fadrosh, S Gupta, H Guo, C Fraser, W Bishai PloS one 9 (5), e97048, 2014 | 109 | 2014 |
| Going deeper: metagenome of a hadopelagic microbial community EA Eloe, DW Fadrosh, M Novotny, L Zeigler Allen, M Kim, MJ Lombardo, ... PloS one 6 (5), e20388, 2011 | 92 | 2011 |
Christine ShulseLos Medanos CollegeVerified email at lbl.gov
Christine ShulseLos Medanos CollegeVerified email at lbl.gov