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Zhang Zhenyu
Zhang Zhenyu
Director of Bioinformatics, University of Chicago
Verified email at bsd.uchicago.edu
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Year
Before and after: comparison of legacy and harmonized TCGA genomic data commons’ data
GF Gao, JS Parker, SM Reynolds, TC Silva, LB Wang, W Zhou, R Akbani, ...
Cell systems 9 (1), 24-34. e10, 2019
1532019
Discovering novel pharmacogenomic biomarkers by imputing drug response in cancer patients from large genomics studies
P Geeleher, Z Zhang, F Wang, RF Gruener, A Nath, G Morrison, S Bhutra, ...
Genome research 27 (10), 1743-1751, 2017
1172017
Uniform genomic data analysis in the NCI Genomic Data Commons
Z Zhang, K Hernandez, J Savage, S Li, D Miller, S Agrawal, F Ortuno, ...
Nature communications 12 (1), 1226, 2021
1022021
Functional characterization and expression analysis of members of the UDP-GalNAc: polypeptide N-acetylgalactosaminyltransferase family from Drosophila melanogaster
KG Ten Hagen, DT Tran, TA Gerken, DS Stein, Z Zhang
Journal of Biological Chemistry 278 (37), 35039-35048, 2003
912003
The NCI genomic data commons
AP Heath, V Ferretti, S Agrawal, M An, JC Angelakos, R Arya, R Bajari, ...
Nature genetics 53 (3), 257-262, 2021
852021
Accurate and rapid prediction of tuberculosis drug resistance from genome sequence data using traditional machine learning algorithms and CNN
X Kuang, F Wang, KM Hernandez, Z Zhang, RL Grossman
Scientific reports 12 (1), 2427, 2022
542022
Sulfation of eggshell components by Pipe defines dorsal-ventral polarity in the Drosophila embryo
Z Zhang, LM Stevens, D Stein
Current Biology 19 (14), 1200-1205, 2009
372009
Cancer expression quantitative trait loci (eQTLs) can be determined from heterogeneous tumor gene expression data by modeling variation in tumor purity
P Geeleher, A Nath, F Wang, Z Zhang, AN Barbeira, J Fessler, ...
Genome biology 19, 1-14, 2018
362018
Mutation of the retinoblastoma tumor suppressor gene sensitizes cancers to mitotic inhibitor induced cell death
J Zhao, Z Zhang, Y Liao, W Du
American journal of cancer research 4 (1), 42, 2014
212014
Immunogenicity of a recombinant fusion protein of tandem repeat epitopes of foot-and-mouth disease virus type Asia 1 for guinea pigs
Q Zhang, YQ Yang, ZY Zhang, I Li, WY Yan, WJ Jiang, AG Xin, CX Lei, ...
Acta virologica 46 (1), 1-10, 2002
202002
Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells
TJ Looney, L Zhang, CH Chen, JH Lee, S Chari, FF Mao, M Pelizzola, ...
Genome Research 24 (2), 267-280, 2014
162014
Distinct functional specificities are associated with protein isoforms encoded by the Drosophila dorsal-ventral patterning gene pipe
Z Zhang, X Zhu, LM Stevens, D Stein
Oxford University Press for The Company of Biologists Limited 136 (16), 2779 …, 2009
152009
The Biomedical Research Hub: a federated platform for patient research data
C Barnes, B Bajracharya, M Cannalte, Z Gowani, W Haley, T Kass-Hout, ...
Journal of the American Medical Informatics Association 29 (4), 619-625, 2022
122022
Localization and activation of the Drosophila protease easter require the ER-resident saposin-like protein seele
D Stein, I Charatsi, YS Cho, Z Zhang, J Nguyen, R DeLotto, S Luschnig, ...
Current Biology 20 (21), 1953-1958, 2010
102010
No requirement for localized Nudel protein expression in Drosophila embryonic axis determination
DS Stein, YS Cho, Z Zhang, LM Stevens
Fly 2 (4), 220-228, 2008
82008
Racial and ethnic disparities in the observed COVID-19 case fatality rate among the US population
LP Schumm, MC Giurcanu, KJ Locey, JC Ortega, Z Zhang, RL Grossman
Annals of Epidemiology 74, 118-124, 2022
72022
Discovering drugs to overcome chemoresistance in ovarian cancers based on the cancer genome atlas tumor transcriptome profile
F Wang, JTH Chang, Z Zhang, G Morrison, A Nath, S Bhutra, RS Huang
Oncotarget 8 (70), 115102, 2017
42017
Designing and deploying a bioinformatics software-defined network exchange (SDX): Architecture, services, capabilities, and foundation technologies
J Mambretti, J Chen, F Yeh, R Grossman, P Nash, A Heath, R Arya, ...
2017 20th Conference on Innovations in Clouds, Internet and Networks (ICIN …, 2017
42017
A recombinant fusion protein and DNA vaccines against foot-and-mouth disease virus type Asia 1 infection in guinea pigs.
Q Zhang, MW Zhu, YQ Yang, M Shao, ZY Zhang, HY Lan, WY Yan, JJ Wu, ...
Acta virologica 47 (4), 237-243, 2003
32003
Using swine self IgG H chain as a carrier to construct an recombinant vaccine against type O foot-and-mouth disease virus infection
Z Kai, C Guanghui, Z Zhenyu, Y Weiyao, Z Zhaoxin
Sheng wu Gong Cheng xue bao= Chinese Journal of Biotechnology 16 (6), 679-683, 2000
32000
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