Nikos C Kyrpides

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Natalia IvanovaDOE Joint Genome InstituteVerified email at lbl.gov
Tanja WoykeDOE Joint Genome InstituteVerified email at lbl.gov
TBK ReddyLawrence Berkeley National LaboratoryVerified email at lbl.gov
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
Emiley Eloe-FadroshMetagenome Program Head, Joint Genome InstituteVerified email at lbl.gov
David Páez-EspinoMammoth BioSciences // DOE-JGIVerified email at mammothbiosci.com
Christos Α. OuzounisAUTH, Thessalonica, Greece • CERTH, Thessalonica, GreeceVerified email at csd.auth.gr
William B WhitmanProfessor of Microbiology, University of GeorgiaVerified email at uga.edu
Wayne ReeveMurdoch UniversityVerified email at murdoch.edu.au
Simon RouxDOE Joint Genome InstituteVerified email at lbl.gov
Edward M RubinScience CorpsVerified email at science-corps.org
Georgios A. PavlopoulosDirector of Bioinformatics (Research Associate Professor), IFBR - BSRC Fleming & pMedGR (UoA)Verified email at fleming.gr
Stephen NayfachDOE Joint Genome InstituteVerified email at lbl.gov
Nektarios TavernarakisProfessor, Medical School, University of Crete & IMBB - FORTHVerified email at imbb.forth.gr
Folker MeyerUniversity of Duisburg-Essen; University Hospital EssenVerified email at uni-due.de
Jonathan A. EisenProfessor, University of California, Davis (UC Davis), Department of Evolution and EcologyVerified email at ucdavis.edu
Kostas KonstantinidisGeorgia TechVerified email at ce.gatech.edu
Susannah TringeEnvironmental Genomics and Systems Biology, Lawrence Berkeley National LaboratoryVerified email at lbl.gov
Jack A GilbertUniversity of California, San DiegoVerified email at ucsd.edu
Jennifer DoudnaProfessor of Molecular and Cell Biology and Chemistry, UC BerkeleyVerified email at berkeley.edu

Nikos C Kyrpides

Joint Genome Institute, Lawrence Berkeley National Laboratory

Verified email at lbl.gov - Homepage

Metagenomics Microbial Genomics Microbial Diversity Microbiome Virome


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012	8356	2012
A framework for human microbiome research nature 486 (7402), 215-221, 2012	1960	2012
Insights into the phylogeny and coding potential of microbial dark matter C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ... Nature 499 (7459), 431-437, 2013	1904	2013
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus HP Klenk, RA Clayton, JF Tomb, O White, KE Nelson, KA Ketchum, ... Nature 390 (6658), 364-370, 1997	1684	1997
Protein interaction maps for complete genomes based on gene fusion events AJ Enright, I Iliopoulos, NC Kyrpides, CA Ouzounis Nature 402 (6757), 86-90, 1999	1423	1999
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite F Warnecke, P Luginbühl, N Ivanova, M Ghassemian, TH Richardson, ... Nature 450 (7169), 560-565, 2007	1410	2007
IMG: the integrated microbial genomes database and comparative analysis system VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, Y Grechkin, ... Nucleic acids research 40 (D1), D115-D122, 2012	1280	2012
The minimum information about a genome sequence (MIGS) specification D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ... Nature biotechnology 26 (5), 541-547, 2008	1237	2008
A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea D Wu, P Hugenholtz, K Mavromatis, R Pukall, E Dalin, NN Ivanova, ... Nature 462 (7276), 1056-1060, 2009	1025	2009
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis N Ivanova, A Sorokin, I Anderson, N Galleron, B Candelon, V Kapatral, ... Nature 423 (6935), 87-91, 2003	942	2003
IMG ER: a system for microbial genome annotation expert review and curation VM Markowitz, K Mavromatis, NN Ivanova, IMA Chen, K Chu, ... Bioinformatics 25 (17), 2271-2278, 2009	898	2009
Experimental Determination and System Level Analysis of Essential Genes in Escherichia coli MG1655 SY Gerdes, MD Scholle, JW Campbell, G Balazsi, E Ravasz, ... Journal of bacteriology 185 (19), 5673-5684, 2003	885	2003
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata K Liolios, IMA Chen, K Mavromatis, N Tavernarakis, P Hugenholtz, ... Nucleic acids research 38 (suppl_1), D346-D354, 2010	868	2010
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017	853	2017
A catalog of reference genomes from the human microbiome Human Microbiome Jumpstart Reference Strains Consortium, KE Nelson, ... Science 328 (5981), 994-999, 2010	771	2010
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities HG Martin, N Ivanova, V Kunin, F Warnecke, KW Barry, AC McHardy, ... Nature biotechnology 24 (10), 1263-1269, 2006	753	2006
The genome sequence of the facultative intracellular pathogen Brucella melitensis VG DelVecchio, V Kapatral, RJ Redkar, G Patra, C Mujer, T Los, ... Proceedings of the National Academy of Sciences 99 (1), 443-448, 2002	710	2002
Toward an online repository of Standard Operating Procedures (SOPs) for (meta) genomic annotation SV Angiuoli, A Gussman, W Klimke, G Cochrane, D Field, GM Garrity, ... OMICS A Journal of Integrative Biology 12 (2), 137-141, 2008	692	2008
Uncovering Earth’s virome D Paez-Espino, EA Eloe-Fadrosh, GA Pavlopoulos, AD Thomas, ... Nature 536 (7617), 425-430, 2016	691	2016
CRISPR recognition tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats C Bland, TL Ramsey, F Sabree, M Lowe, K Brown, NC Kyrpides, ... BMC bioinformatics 8 (1), 1-8, 2007	673	2007

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