Ion Mandoiu

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Alexander ZelikovskyDistinguished University Professor at Georgia State UniversityVerified email at gsu.edu
Andrew B. KahngProfessor of CSE and ECE, UC San DiegoVerified email at eng.ucsd.edu
Pramod K Srivastava PhD MDUniversity of Connecticut School of MedicineVerified email at uchc.edu
Sahar AL SeesiAssociate Professor, Computer Science, Southern Connecticut State UniversityVerified email at southernct.edu
Serghei MangulAssistant Professor at USCVerified email at usc.edu
Pavel SkumsGeorgia State UniversityVerified email at gsu.edu
Bassam TorkAssistant Professor of Computer Science, Al-Quds Open UniversityVerified email at qou.edu
Marmar MoussaSchool of Medicine, University of ConnecticutVerified email at uconn.edu
Craig NelsonAssociate Professor of Genetics and Genomics, MCB, UCONNVerified email at uconn.edu
James LindsayAssociate Director of Knowledge Systems Group, Dana-Farber Cancer InstituteVerified email at dfci.harvard.edu
Jorge DuitamaUniversidad de los AndesVerified email at uniandes.edu.co
Tatiana Shcheglova, PhDResearch AssociateVerified email at uchc.edu
Nicholas MancusoAssistant Professor at Keck School of Medicine, University of Southern CaliforniaVerified email at med.usc.edu
Brian M. BakerDepartment of Chemistry & Biochemistry, University of Notre DameVerified email at nd.edu
Sanguthevar RajasekaranProfessor of Computer Science and Engineering, University of ConnecticutVerified email at engr.uconn.edu
Adrian CaciulaClinical Assistant Professor, Yeshiva UniversityVerified email at yu.edu
Alexander ArtyomenkoBioinformatics Scientist at Guardant Health Inc.Verified email at guardanthealth.com
Kishori M KonwarComputer Science and Al Lab, Massachusetts Inst. of TechnologyVerified email at mit.edu
Vijay VaziraniDistinguished Professor, Dept. of Computer Science, University of California, Irvine.Verified email at ics.uci.edu
Bogdan PasaniucAssociate Professor at UCLAVerified email at ucla.edu

Ion Mandoiu

University of Connecticut

Verified email at engr.uconn.edu - Homepage

Algorithms bioinformatics computational genomics immunogenomics


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Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21 (1), 1-35, 2020	631	2020
Genomic and bioinformatic profiling of mutational neoepitopes reveals new rules to predict anticancer immunogenicity F Duan, J Duitama, S Al Seesi, CM Ayres, SA Corcelli, AP Pawashe, ... Journal of Experimental Medicine 211 (11), 2231-2248, 2014	356	2014
Estimation of alternative splicing isoform frequencies from RNA-Seq data M Nicolae, S Mangul, II Măndoiu, A Zelikovsky Algorithms for molecular biology 6, 1-13, 2011	251	2011
Selecting forwarding neighbors in wireless ad hoc networks G Călinescu, I Măndoiu, PJ Wan, A Zelikovsky Proceedings of the 5th international workshop on Discrete algorithms and …, 2001	249	2001
Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction DK Wells, MM van Buuren, KK Dang, VM Hubbard-Lucey, KCF Sheehan, ... Cell 183 (3), 818-834. e13, 2020	209	2020
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development MB Renfree, AT Papenfuss, JE Deakin, J Lindsay, T Heider, K Belov, ... Genome biology 12 (8), 1-26, 2011	195	2011
Inferring viral quasispecies spectra from 454 pyrosequencing reads I Astrovskaya, B Tork, S Mangul, K Westbrooks, I Măndoiu, P Balfe, ... BMC bioinformatics 12 (6), 1-10, 2011	148	2011
Symmetric connectivity with minimum power consumption in radio networks G Călinescu, II Măndoiu, A Zelikovsky Foundations of Information Technology in the Era of Network and Mobile …, 2002	142	2002
Power efficient range assignment in ad-hoc wireless networks E Althaus, G Calinescu, II Mandoiu, S Prasad, N Tchervenski, ... 2003 IEEE Wireless Communications and Networking, 2003. WCNC 2003. 3, 1889-1894, 2003	116	2003
Power efficient range assignment for symmetric connectivity in static ad hoc wireless networks E Althaus, G Călinescu, II Măndoiu, S Prasad, N Tchervenski, ... Wireless Networks 12, 287-299, 2006	106	2006
Highly scalable algorithms for rectilinear and octilinear Steiner trees AB Kahng, II Măndoiu, AZ Zelikovsky Proceedings of the 2003 Asia and South Pacific Design Automation Conference …, 2003	104	2003
Identification of mammalian orthologs using local synteny J Jun, II Mandoiu, CE Nelson BMC genomics 10 (1), 1-13, 2009	81	2009
Non-tree routing for reliability and yield improvement AB Kahng, B Liu, II Mǎandoiu Proceedings of the 2002 IEEE/ACM international conference on Computer-aided …, 2002	77	2002
The Y architecture for on-chip interconnect: analysis and methodology H Chen, CK Cheng, AB Kahng, II Mandoiu, Q Wang, B Yao IEEE Transactions on Computer-Aided Design of Integrated Circuits and …, 2005	73	2005
DNA-BAR: distinguisher selection for DNA barcoding B DasGupta, KM Konwar, II Măndoiu, AA Shvartsman Bioinformatics 21 (16), 3424-3426, 2005	62	2005
Minimum multicolored subgraph problem in multiplex PCR primer set selection and population haplotyping MT Hajiaghayi, K Jain, LC Lau, II Măndoiu, A Russell, VV Vazirani Computational Science–ICCS 2006: 6th International Conference, Reading, UK …, 2006	60*	2006
Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicates S Al Seesi, YT Tiagueu, A Zelikovsky, II Măndoiu BMC genomics 15 (8), 1-10, 2014	58	2014
Towards accurate detection and genotyping of expressed variants from whole transcriptome sequencing data J Duitama, PK Srivastava, II Măndoiu BMC genomics 13, 1-10, 2012	57	2012
A new heuristic for rectilinear Steiner trees II Mandoiu, VV Vazirani, JL Ganley IEEE Transactions on Computer-Aided Design of Integrated Circuits and …, 2000	57	2000
Area under the curve as a tool to measure kinetics of tumor growth in experimental animals F Duan, S Simeone, R Wu, J Grady, I Mandoiu, PK Srivastava Journal of immunological methods 382 (1-2), 224-228, 2012	54	2012

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